Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0Y5F3 | FLNA | Filamin A | Homo sapiens (Human) | 232 aa |
Protein Details: H0Y5F3 (FLNA)
Protein Information
| Accession | H0Y5F3 |
|---|---|
| Protein Names | Filamin A |
| Gene Symbol | FLNA |
| Organism | Homo sapiens (Human) |
| Length | 232 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29575903 31251020 32944167 36430497 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XKYVICVRFG11GEHVPNSPFQ21VTALAGDQPS31VQPPLRSQQL41APQYTYAQGG
51-10051QQTWAPERPL61VGVNGLDVTS71LRPFDLVIPF81TIKKGEITGE91VRMPSGKVAQ
101-150101PTITDNKDGT111VTVRYAPSEA121GLHEMDIRYD131NMHIPGSPLQ141FYVDYVNCGH
151-200151VTAYGPGLTH161GVVNKPATFT171VNTKDAGEGD181DSMRMSHLKV191GSAADIPINI
201-232201SETDLSLLTA211TVVPPSGREE221PCLLKRLRNG231HV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 6 | SWISSPALM DBPTM CYSMODDB | Immunoglobulin-like fold Immunoglobulin E-set Filamin/ABP280 repeat-like | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.03
|
| 148 | - | - | - |
Deep-Palm: 0.14
|
|
| 222 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.18
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.333
4
PC3
Specificity: 0.333
4/4 (100.0%)
4
cerebral cortex
Specificity: 0.333
4/4 (100.0%)
3
LNCaP
Specificity: 0.250
3/3 (100.0%)
1
HeLa cell
Specificity: 0.083
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.