Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0Y6Y6 | CD1C | CD1c molecule | Homo sapiens (Human) | 281 aa |
Protein Details: H0Y6Y6 (CD1C)
Protein Information
| Accession | H0Y6Y6 |
|---|---|
| Protein Names | CD1c molecule |
| Gene Symbol | CD1C |
| Organism | Homo sapiens (Human) |
| Length | 281 aa |
| Isoforms | No isoforms |
| Related PMIDs | 32651440 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XFLHNWSKGN11FSNEELSDLE21LLFRFYLFGL31TREIQDHASQ41DYSKYPFEVQ
51-10051VKAGCELHSG61KSPEGFFQVA71FNGLDLLSFQ81NTTWVPSPGC91GSLAQSVCHL
101-150101LNHQYEGVTE111TVYNLIRSTC121PRFLLGLLDA131GKMYVHRQVR141PEAWLSSRPS
151-200151LGSGQLLLVC161HASGFYPKPV171WVTWMRNEQE181QLGTKHGDIL191PNADGTWYLQ
201-250201VILEVASEEP211AGLSCRVRHS221SLGGQDIILY231WAHIRTSCET241LPPDSPIVLR
251-281251TQQPRSLVQY261SDAIPSTLHL271NCFSFCIINI281C
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 55 | - | - | - |
Deep-Palm: 0.65
|
|
| 90 | - | - | - |
Deep-Palm: 0.30
|
|
| 98 | - | - | - |
Deep-Palm: 0.41
|
|
| 120 | - | - | - |
Deep-Palm: 0.96
|
|
| 160 | - | - | - |
Deep-Palm: 0.85
|
|
| 215 | - | - | - |
Deep-Palm: 0.97
|
|
| 238 | - | - | - |
Deep-Palm: 0.65
|
|
| 272 | - | - | - |
Deep-Palm: 0.01
|
|
| 276 | - | - | - |
Deep-Palm: 0.01
|
|
| 281 | - | - | - |
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Jurkat T cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 40 | S → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 89 | R → C | 0.019272 | SNP | Missense Mutation | SKCM |
| 89 | R → C | 0.004219 | SNP | Missense Mutation | SARC |
| 154 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 209 | W → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 252 | G → C | 0.002294 | SNP | Missense Mutation | OV |
| 280 | C → F | 0.001764 | SNP | Missense Mutation | LUAD |