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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H0YBN1 LAPTM4B Lysosomal protein transmembrane 4 beta Homo sapiens (Human) 152 aa

Protein Details: H0YBN1 (LAPTM4B)

Protein Information
AccessionH0YBN1
Protein NamesLysosomal protein transmembrane 4 beta
Gene SymbolLAPTM4B
OrganismHomo sapiens (Human)
Length152 aa
IsoformsNo isoforms
Related PMIDs No related PMIDs
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MKMVAPWTRF11YSNSCCLCCH21VRTGTILLGV31WYLIINAVVL41LILLSALADP
51-10051DQYNFSSSEL61GGDFEFMDDA71KILFNLSADM81CIAIAISLLM91ILICAMATYG
101-150101AYKQRAAWII111PFFCYQIFDF121ALNMLVAITV131LIYPNSIQEY141IRQLPPNFPY
151-152151RD
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
15 SWISSPALM DBPTM CYSMODDB Lysosomal-associated transmembrane transporter - -
GPS-Palm: 0.72
Deep-Palm: 0.77
16 SWISSPALM DBPTM CYSMODDB Lysosomal-associated transmembrane transporter - -
GPS-Palm: 0.72
Deep-Palm: 0.76
18 SWISSPALM DBPTM CYSMODDB Lysosomal-associated transmembrane transporter - -
GPS-Palm: 0.73
Deep-Palm: 0.77
19 SWISSPALM DBPTM CYSMODDB Lysosomal-associated transmembrane transporter - -
GPS-Palm: 0.88
Deep-Palm: 0.78
81 - - -
Deep-Palm: 0.16
94 - - -
GPS-Palm: 0.71
Deep-Palm: 0.68
114 - - -
GPS-Palm: 0.75
Deep-Palm: 0.33
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
182 Y → C 0.001764 SNP Missense Mutation LUAD