Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0YF29 | C8orf82 | Chromosome 8 open reading frame … | Homo sapiens (Human) | 261 aa |
Protein Details: H0YF29 (C8orf82)
Protein Information
| Accession | H0YF29 |
|---|---|
| Protein Names | Chromosome 8 open reading frame 82 |
| Gene Symbol | C8orf82 |
| Organism | Homo sapiens (Human) |
| Length | 261 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 32651440 32944167 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XGELGRSGPR11LLHGPRPCCV21VQLRTLSYKS31PAPALTSRRC41QGDTRAALPF
51-10051FGSPVKRQLH61VREAAGQVVS71AEEVVQLITN81LKRGKRCGKE91LADQGAELFL
101-150101DDSKMKNFIT111CFKDPQFLVT121FFSRLRPNRS131GRYEAAFPFL141SPCGRERNFL
151-200151RCEDRPVVFT161HLLTADHGPP171RLSYCGGGEA181LAVPFEPARL191LPLAANGRLY
201-250201HPAPERAGGV211GLVRSALAFE221LSACFEYGPG231APALPSHVRW241QGRRLALTMD
251-261251LAPLLLAARS261P
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 18 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.95
|
|
| 19 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.92
|
|
| 40 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.90
|
|
| 87 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.97
|
|
| 111 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.89
|
|
| 143 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.92
|
|
| 152 | - | - |
LNCaP
(31251020)
|
Deep-Palm: 0.78
|
|
| 175 | - | - |
LNCaP
(31251020)
|
Deep-Palm: 0.97
|
|
| 224 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.96
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
4
LNCaP
Specificity: 0.444
4/4 (100.0%)
3
PC3
Specificity: 0.333
3/3 (100.0%)
1
Jurkat T cell
Specificity: 0.111
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP cells (Mass)
Specificity: 0.111
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 87 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 106 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |