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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H0YGW7 ABCF1 ATP-binding cassette sub-family F member … Homo sapiens (Human) 596 aa

Protein Details: H0YGW7 (ABCF1)

Protein Information
Accession H0YGW7
Protein Names ATP-binding cassette sub-family F member 1 (ATP-binding cassette 50)
Gene Symbol ABCF1
Organism Homo sapiens (Human)
Length 596 aa
Isoforms No isoforms
Related PMIDs 31251020 31382980
Database Sources No database sources
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.923
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
12
LNCaP cells
Specificity: 0.923
12/46 (26.1%)
1
U937 cells
Specificity: 0.077
1/1 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501XAHLSKKEKK11KLKKQMEYER21QVASLKAANA31AENDFSVSQA41EMSSRQAMLE
51-10051NASDIKLEKF61SISAHGKELF71VNADLYIVAG81RRYGLVGPNG91KGKTTLLKHI
101-150101ANRALSIPPN111IDVLLCEQEV121VADETPAVQA131VLRADTKRLK141LLEEERRLQG
151-200151QLEQGDDTAA161ERLEKVYEEL171RATGAAAAEA181KARRILAGLG191FDPEMQNRPT
201-250201QKFSGGWRMR211VSLARALFME221PTLLMLDEPT231NHLDLNAVIW241LNNYLQGWRK
251-300251TLLIVSHDQG261FLDDVCTDII271HLDAQRLHYY281RGNYMTFKKM291YQQKQKELLK
301-350301QYEKQEKKLK311ELKAGGKSTK321QAEKQTKEAL331TRKQQKCRRK341NQDEESQEAP
351-400351ELLKRPKEYT361VRFTFPDPPP371LSPPVLGLHG381VTFGYQGQKP391LFKNLDFGID
401-450401MDSRICIVGP411NGVGKSTLLL421LLTGKLTPTH431GEMRKNHRLK441IGFFNQQYAE
451-500451QLRMEETPTE461YLQRGFNLPY471QDARKCLGRF481GLESHAHTIQ491ICKLSGGQKA
501-550501RVVFAELACR511EPDVLILDEP521TNNLDIESID531ALGEAINEYK541GAVIVVSHDA
551-596551RLITETNCQL561WVVEEQSVSQ571IDGDFEDYKR581EVLEALGEVM591VSRPRE
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
406 Prediction (Medium) - -
476 Prediction (Low) - -
492 Prediction (Medium) - -
509 Prediction (Medium) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
22 S → C 0.002141 SNP Missense Mutation SKCM
294 R → C 0.002288 SNP Missense Mutation STAD
332 Y → C 0.001887 SNP Missense Mutation UCEC
457 R → C 0.004219 SNP Missense Mutation SARC
459 R → C 0.001969 SNP Missense Mutation LGG
604 R → C 0.001887 SNP Missense Mutation UCEC
655 C → F 0.002294 SNP Missense Mutation OV
702 R → C 0.001887 SNP Missense Mutation UCEC
744 S → C 0.001014 SNP Missense Mutation BRCA
788 Y → C 0.001764 SNP Missense Mutation LUAD