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Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0YHA7 | RPL18 | Ribosomal protein L18 | Homo sapiens (Human) | 167 aa |
Protein Details: H0YHA7 (RPL18)
Protein Information
| Accession | H0YHA7 |
|---|---|
| Protein Names | Ribosomal protein L18 |
| Gene Symbol | RPL18 |
| Organism | Homo sapiens (Human) |
| Length | 167 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 32944167 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVKLYRFLAR11RTNSTFNQVV21LKRLFMSRTN31RPPLSLSRMI41RKMKLPGREN
51-10051KTAVVVGTIT61DDVRVQEVPK71LKPCPLHQVC81ALRVTSRARS91RILRAGGKIL
101-150101TFDQLALDSP111KGCGTVLLSG121PRKGREVYRH131FGKAPGTPHS141HTKPYVRSKG
151-167151RKFERARGRR161ASRGYKN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 74 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.95
|
|
| 80 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.93
|
|
| 113 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein 60S L18 and 50S L18e |
HeLa
(29575903)
|
cerebral cortex
(36430497)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
3
PC3
Specificity: 0.500
3/3 (100.0%)
1
LNCaP
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Cerebral Cortex (Mass)
Specificity: 0.333
2/4 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.