Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0YL26 | TRAF3 | TNF receptor associated factor 3 | Homo sapiens (Human) | 290 aa |
Protein Details: H0YL26 (TRAF3)
Protein Information
| Accession | H0YL26 |
|---|---|
| Protein Names | TNF receptor associated factor 3 |
| Gene Symbol | TRAF3 |
| Organism | Homo sapiens (Human) |
| Length | 290 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501SRGCAEQLML11GHLLVHLKND21CHFEELPCVR31PDCKEKVLRK41DLRDHVEKAC
51-10051KYREATCSHC61KSQVPMIALQ71GTNQQIKAHE81ASSAVQHVNL91LKEWSNSLEK
101-150101KVSLLQNESV111EKNKSIQSLH121NQICSFEIEI131ERQKEMLRNN141ESKILHLQRV
151-200151IDSQAEKLKE161LDKEIRPFRQ171NWEEADSMKS181SVESLQNRVT191ELESVDKSAG
201-250201QVARNTGLLE211SQLSRHDQML221SVHDIRLADM231DLRFQVLETA241SYNGVLIWKI
251-290251RDYKRRKQEA261VMGKTLSLYS271QPFYTGYFGY281KMCARVYLNG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | SWISSPALM DBPTM CYSMODDB | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.03
|
| 21 | Zinc finger, TRAF-type Zinc finger, RING/FYVE/PHD-type TRAF domain-like | - | - |
Deep-Palm: 0.16
|
|
| 28 | Zinc finger, TRAF-type Zinc finger, RING/FYVE/PHD-type TRAF domain-like | - | - |
Deep-Palm: 0.28
|
|
| 33 | TRAF domain-like Zinc finger, TRAF-type Zinc finger, RING/FYVE/PHD-type | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.16
|
|
| 50 | Zinc finger, RING/FYVE/PHD-type | - | - |
Deep-Palm: 0.45
|
|
| 57 | - | - | - |
Deep-Palm: 0.17
|
|
| 60 | - | - | - |
Deep-Palm: 0.09
|
|
| 124 | - | - | - |
Deep-Palm: 0.50
|
|
| 283 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 73 | C → C | 0.001887 | SNP | Silent | UCEC |
| 150 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 150 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 199 | C → C | 0.002506 | SNP | Silent | COAD |
| 239 | C → C | 0.001887 | SNP | Silent | UCEC |
| 414 | Y → C | 0.002033 | SNP | Missense Mutation | LUSC |