Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H0YMV8 | RPS27L | 40S ribosomal protein S27 | Homo sapiens (Human) | 100 aa |
Protein Details: H0YMV8 (RPS27L)
Protein Information
| Accession | H0YMV8 |
|---|---|
| Protein Names | 40S ribosomal protein S27 |
| Gene Symbol | RPS27L |
| Organism | Homo sapiens (Human) |
| Length | 100 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 36430497 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MCQRCGLKLI11VIICFFVQLA21RDLLHPSLEE31EKKKHKKKRL41VQSPNSYFMD
51-10051VKCPGCYKIT61TVFSHAQTVV71LCVGCSTVLC81QPTGGKARLT91EGCSFRRKQH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 2 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.02
|
|
| 5 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.02
|
|
| 14 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.55
|
|
| 53 | - | - | - |
Deep-Palm: 0.06
|
|
| 56 | - | - | - |
Deep-Palm: 0.03
|
|
| 72 | - | - | - |
Deep-Palm: 0.58
|
|
| 75 | - | - | - |
Deep-Palm: 0.83
|
|
| 80 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.94
|
|
| 93 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein S27 |
HeLa
(29575903)
|
Unknown
(32651440)
cerebral cortex
(36430497)
|
GPS-Palm: 0.96
Deep-Palm: 0.06
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
1
LNCaP
Specificity: 0.333
1/1 (100.0%)
1
cerebral cortex
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Cerebral Cortex (Mass)
Specificity: 0.333
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.