Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H3BM89 RPL4; hCG_2004318 Large ribosomal subunit protein uL4 … Homo sapiens (Human) 333 aa

Protein Details: H3BM89 (RPL4)

Protein Information
Accession H3BM89
Protein Names Large ribosomal subunit protein uL4 (60S ribosomal protein L4)
Gene Symbol RPL4; hCG_2004318
Organism Homo sapiens (Human)
Length 333 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.927
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
38
LNCaP cells
Specificity: 0.927
38/46 (82.6%)
3
PC3 cells
Specificity: 0.073
3/4 (75.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MCRGGRMFAP11TKTWRRWHRR21VNTTQKRYAI31CSALAASALP41ALVMSKGHRI
51-10051EEVPELPLVV61EDKVEGYKKT71KEAVLLLKKL81KAWNDIKKVY91ASQRMRAGKG
101-150101KMRNRRRIQR111RGPCIIYNED121NGIIKAFRNI131PGITLLNVSK141LNILKLAPGG
151-200151HVGRFCIWTE161SAFRKLDELY171GTWRKAASLK181SNYNLPMHKM191INTDLSRILK
201-250201SPEIQRALRA211PRKKIHRRVL221KKNPLKNLRI231MLKLNPYAKT241MRRNTILRQA
251-300251RNHKLRVDKA261AAAAAALQAK271SDEKAAVAGK281KPVVGKKGKK291AAVGVKKQKK
301-333301PLVGKKAAAT311KKPAPEKKPA321EKKPTTEEKK331PAA
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
2 Prediction (High) - -
31 Prediction (Medium) - -
114 Prediction (Medium) - -
156 CYSMODDB SWISSPALM DBPTM Prediction (High) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
97 R → C 0.002506 SNP Missense Mutation COAD
143 R → C 0.002141 SNP Missense Mutation SKCM
200 R → C 0.001887 SNP Missense Mutation UCEC
268 R → C 0.001887 SNP Missense Mutation UCEC
336 R → C 0.002033 SNP Missense Mutation THCA
342 R → C 0.001764 SNP Missense Mutation LUAD