Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H3BN76 BBS4 Bardet-Biedl syndrome 4 Homo sapiens (Human) 77 aa

Protein Details: H3BN76 (BBS4)

Protein Information
AccessionH3BN76
Protein NamesBardet-Biedl syndrome 4
Gene SymbolBBS4
OrganismHomo sapiens (Human)
Length77 aa
IsoformsNo isoforms
Related PMIDs No related PMIDs
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MAEERVATVS11AEILFSCPAA21GQGKLAGGFC31PMQRFLERGG41AGCRASQGGR
51-7751GDTVPFLLSR61ELVAWGKSGY71LAAQVLF
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
17 - - -
GPS-Palm: 0.82
Deep-Palm: 0.93
30 SWISSPALM DBPTM CYSMODDB - - -
GPS-Palm: 0.87
Deep-Palm: 0.94
43 - - -
GPS-Palm: 0.89
Deep-Palm: 0.94
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
15 S → C 0.002033 SNP Missense Mutation LUSC
93 C → R 0.002288 SNP Missense Mutation STAD
145 Y → C 0.002506 SNP Missense Mutation COAD