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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H3BPA9 NUP93 Nuclear pore complex protein Nup93 Homo sapiens (Human) 229 aa

Protein Details: H3BPA9 (NUP93)

Protein Information
Accession H3BPA9
Protein Names Nuclear pore complex protein Nup93
Gene Symbol NUP93
Organism Homo sapiens (Human)
Length 229 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.923
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
36
LNCaP cells
Specificity: 0.923
36/46 (78.3%)
3
PC3 cells
Specificity: 0.077
3/4 (75.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDTEGFELDD11KSISDMWTMV21KQMTDVLLTP31ATDALKNRSS41VEVRMEFVRQ
51-10051ALAYLEQSYK61NYTLVTVFGN71LHQAQLGGVP81GTYQLVRSFL91NIKLPAPLPG
101-150101LQDGEVEGHP111VWALIYYCMR121CGDLLAASQV131VNRAQHQLGE141FKTWFQEYMN
151-200151SKDRRLSPAT161ENKLRLHYRR171ALRNNTDPYK181RAVYCIIGRC191DVTDNQSEVA
201-229201DKTEDYLWLK211LNQVCFDDDG221TSSPQDRLT
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
118 Prediction (Medium) - -
185 CYSMODDB SWISSPALM DBPTM Prediction (Low) Nup93/Nic96 -
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
42 R → C 0.002288 SNP Missense Mutation STAD
44 R → C 0.005435 SNP Missense Mutation ESCA
137 W → C 0.002294 SNP Missense Mutation OV
245 R → C 0.002506 SNP Missense Mutation COAD
324 Y → C 0.002288 SNP Missense Mutation STAD
327 R → C 0.003774 SNP Missense Mutation UCEC
351 W → C 0.003559 SNP Missense Mutation KIRP
355 Y → C 0.001887 SNP Missense Mutation UCEC
415 W → C 0.002033 SNP Missense Mutation LUSC
781 R → C 0.001887 SNP Missense Mutation UCEC