Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H3BPJ0 SNAP23 Synaptosome associated protein 23 Homo sapiens (Human) 127 aa

Protein Details: H3BPJ0 (SNAP23)

Protein Information
Accession H3BPJ0
Protein Names Synaptosome associated protein 23
Gene Symbol SNAP23
Organism Homo sapiens (Human)
Length 127 aa
Isoforms No isoforms
Related PMIDs 19801377 21076176 22496122 29575903 31251020 32651440 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.294
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
5
Jurkat T cells
Specificity: 0.294
5/25 (20.0%)
4
LNCaP cells
Specificity: 0.235
4/46 (8.7%)
4
PC3 cells
Specificity: 0.235
4/4 (100.0%)
2
DU145 cells
Specificity: 0.118
2/2 (100.0%)
1
HeLa cells
Specificity: 0.059
1/1 (100.0%)
1
Endothelial cells
Specificity: 0.059
1/2 (50.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDNLSSEEIQ11QRAHQITDES21LESTRRILGL31AIESQDAGIK41TITMLDEQKE
51-10051QLNRIEEGLD61QINKDMRETE71KTLTELNKCC81GLCVCPCNRL91TPTEIVLILP
101-127101MPEQRNSLTA111KATAVLLYHL121FTSVAPP
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
79 Experimental CYSMODDB SWISSPALM DBPTM Prediction (Medium) - 19801377
80 Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) - 19801377
83 Experimental Prediction (High) - 19801377
85 Experimental Prediction (High) - 19801377
87 Experimental Prediction (High) - 19801377
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
48 Q → Cfs*22 0.001887 INS Frame Shift Ins UCEC
142 R → C 0.001887 SNP Missense Mutation UCEC