Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H3BRN4 | ABAT | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) … | Homo sapiens (Human) | 515 aa |
Protein Details: H3BRN4 (ABAT)
Protein Information
| Accession | H3BRN4 |
|---|---|
| Protein Names | 4-aminobutyrate aminotransferase, mitochondrial (EC 2.6.1.19) (EC 2.6.1.22) ((S)-3-amino-2-methylpropionate transaminase) (GABA aminotransferase) (Gamma-amino-N-butyrate transaminase) (L-AIBAT) |
| Gene Symbol | ABAT |
| Organism | Homo sapiens (Human) |
| Length | 515 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 36430497 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.778
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
14
LNCaP cells
Specificity: 0.778
14/46 (30.4%)
4
Cerebral cortex
Specificity: 0.222
4/4 (100.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
PC3 cells
Specificity: 0.000
0/4 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MWWQHAKGVP11VPQGVMASML21LAQRLACSFQ31HSYRLLVPGS41RHISQAAAKV
51-10051DVEFDYDGPL61MKTEVPGPRS71QELMKQLNII81QNAEAVHFFC91NYEESRGNYL
101-150101VDVDGNRMLD111LYSQISSVPI121GYSHPALLKL131IQQPQNASMF141VNRPALGILP
151-200151PENFVEKLRQ161SLLSVAPKGM171SQLITMACGS181CSNENALKTI191FMWYRSKERG
201-250201QRGFSQEELE211TCMINQAPGC221PDYSILSFMG231AFHGRTMGCL241ATTHSKAIHK
251-300251IDIPSFDWPI261APFPRLKYPL271EEFVKENQQE281EARCLEEVED291LIVKYRKKKK
301-350301TVAGIIVEPI311QSEGGDNHAS321DDFFRKLRDI331ARKHGCAFLV341DEVQTGGGCT
351-400351GKFWAHEHWG361LDDPADVMTF371SKKMMTGGFF381HKEEFRPNAP391YRIFNTWLGD
401-450401PSKNLLLAEV411INIIKREDLL421NNAAHAGKAL431LTGLLDLQAR441YPQFISRVRG
451-500451RGTFCSFDTP461DDSIRNKLIL471IARNKGVVLG481GCGDKSIRFR491PTLVFRDHHA
501-515501HLFLNIFSDI511LADFK
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 27 | Prediction (Medium) | - | - |
| 178 | Prediction (Low) | - | - |
| 181 | Prediction (Medium) | - | - |
| 239 | Prediction (High) | - | - |
| 336 | Prediction (Medium) | - | - |
| 455 | Prediction (Medium) | - | - |
| 482 | Prediction (High) | - | - |
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 25 | S → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 223 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |