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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H3BVG0 NUP93 Nuclear pore complex protein Nup93 Homo sapiens (Human) 880 aa

Protein Details: H3BVG0 (NUP93)

Protein Information
Accession H3BVG0
Protein Names Nuclear pore complex protein Nup93
Gene Symbol NUP93
Organism Homo sapiens (Human)
Length 880 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.923
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
36
LNCaP cells
Specificity: 0.923
36/46 (78.3%)
3
PC3 cells
Specificity: 0.077
3/4 (75.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDTEGFGELL11QQAEQLAAET21EGISELPHVE31RNLQEIQQAG41ERLRSRTLTR
51-10051TSQETADVKA61SVLLGSRGLD71ISHISQRLES81LSAATTFEPL91EPVKDTDIQG
101-150101FLKNEKDNAL111LSAIEESRKR121TFGMAEEYHR131ESMLVEWEQV141KQRILHTLLA
151-200151SGEDALDFTQ161ESEPSYISDV171GPPGRSSLDN181IEMAYARQIY191IYNEKIVNGH
201-250201LQPNLVDLCA211SVAELDDKSI221SDMWTMVKQM231TDVLLTPATD241ALKNRSSVEV
251-300251RMEFVRQALA261YLEQSYKNYT271LVTVFGNLHQ281AQLGGVPGTY291QLVRSFLNIK
301-350301LPAPLPGLQD311GEVEGHPVWA321LIYYCMRCGD331LLAASQVVNR341AQHQLGEFKT
351-400351WFQEYMNSKD361RRLSPATENK371LRLHYRRALR381NNTDPYKRAV391YCIIGRCDVT
401-450401DNQSEVADKT411EDYLWLKLNQ421VCFDDDGTSS431PQDRLTLSQF441QKQLLEDYGE
451-500451SHFTVNQQPF461LYFQVLFLTA471QFEAAVAFLF481RMERLRCHAV491HVALVLFELK
501-550501LLLKSSGQSA511QLLSHEPGDP521PCLRRLNFVR531LLMLYTRKFE541STDPREALQY
551-600551FYFLRDEKDS561QGENMFLRCV571SELVIESREF581DMILGKLEND591GSRKPGVIDK
601-650601FTSDTKPIIN611KVASVAENKG621LFEEAAKLYD631LAKNADKVLE641LMNKLLSPVV
651-700651PQISAPQSNK661ERLKNMALSI671AERYRAQGIS681ANKFVDSTFY691LLLDLITFFD
701-750701EYHSGHIDRA711FDIIERLKLV721PLNQESVEER731VAAFRNFSDE741IRHNLSEVLL
751-800751ATMNILFTQF761KRLKGTSPSS771SSRPQRVIED781RDSGLALLPR791LECNDTISAH
801-850801CNLYLLGSSH811PPTSPSQVAG821TTATPKSSPH831SDYLCWNDTI841PNVWGHQCEA
851-880851GADGGPHELS861AMLCGSLGRH871TVSTSGTWAH
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
325 Prediction (Medium) - -
392 CYSMODDB SWISSPALM DBPTM Prediction (Low) Nup93/Nic96 -
487 Prediction (Low) - -
522 Prediction (Medium) - -
569 Prediction (Low) - -
864 Prediction (Low) - -
Conservation Scores
PhyloP
PhastCons
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
42 R → C 0.002288 SNP Missense Mutation STAD
44 R → C 0.005435 SNP Missense Mutation ESCA
137 W → C 0.002294 SNP Missense Mutation OV
245 R → C 0.002506 SNP Missense Mutation COAD
324 Y → C 0.002288 SNP Missense Mutation STAD
327 R → C 0.003774 SNP Missense Mutation UCEC
351 W → C 0.003559 SNP Missense Mutation KIRP
355 Y → C 0.001887 SNP Missense Mutation UCEC
415 W → C 0.002033 SNP Missense Mutation LUSC
781 R → C 0.001887 SNP Missense Mutation UCEC