Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H7BWY6 | Rbp4 | Retinol-binding protein 4 (Plasma retinol-binding … | Mus musculus (Mouse) | 245 aa |
Protein Details: H7BWY6 (Rbp4)
Protein Information
| Accession | H7BWY6 |
|---|---|
| Protein Names | Retinol-binding protein 4 (Plasma retinol-binding protein) |
| Gene Symbol | Rbp4 |
| Organism | Mus musculus (Mouse) |
| Length | 245 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDPLGWRVWL11HRDHPERSSE21HRRRGTARLT31EGPRVRSGGR41LRGEMEWVWA
51-10051LVLLAALGGG61SAERDCRVSS71FRVKENFDKA81RFSGLWYAIA91KKDPEGLFLQ
101-150101DNIIAEFSVD111EKGHMSATAK121GRVRLLSNWE131VCADMVGTFT141DTEDPAKFKM
151-200151KYWGVASFLQ161RGNDDHWIID171TDYDTFALQY181SCRLQNLDGT191CADSYSFVFS
201-245201RDPNGLSPET211RRLVRQRQEE221LCLERQYRWI231EHNGYCQSRP241SRNSL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 66 | - | - | - |
Deep-Palm: 0.98
|
|
| 132 | - | - | - |
Deep-Palm: 0.94
|
|
| 182 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.06
|
|
| 191 | - | - | - |
Deep-Palm: 0.65
|
|
| 222 | SWISSPALM DBPTM CYSMODDB | - |
liver
(26165157)
| - |
Deep-Palm: 0.65
|
| 236 | - | - | - |
Deep-Palm: 0.04
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Testis
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.750
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.