Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
H7C341 SF3B1 Splicing factor 3b subunit 1 Homo sapiens (Human) 241 aa

Protein Details: H7C341 (SF3B1)

Protein Information
Accession H7C341
Protein Names Splicing factor 3b subunit 1
Gene Symbol SF3B1
Organism Homo sapiens (Human)
Length 241 aa
Isoforms No isoforms
Related PMIDs 31251020 32944167
Database Sources CysModDB dbPTM SwissPalm
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.921
Bubble Size: Positive Samples Count Color Intensity: Positive Ratio
35
LNCaP cells
Specificity: 0.921
35/46 (76.1%)
3
PC3 cells
Specificity: 0.079
3/4 (75.0%)
0
Jurkat T cells
Specificity: 0.000
0/25 (0.0%)
0
U937 cells
Specificity: 0.000
0/1 (0.0%)
0
DU145 cells
Specificity: 0.000
0/2 (0.0%)
0
HeLa cells
Specificity: 0.000
0/1 (0.0%)
0
T cells
Specificity: 0.000
0/4 (0.0%)
0
HAP1 cells
Specificity: 0.000
0/10 (0.0%)
0
293T cells
Specificity: 0.000
0/10 (0.0%)
0
CEMx174 cells
Specificity: 0.000
0/3 (0.0%)
0
Endothelial cells
Specificity: 0.000
0/2 (0.0%)
0
Prefrontal cortex
Specificity: 0.000
0/1 (0.0%)
0
Cerebral cortex
Specificity: 0.000
0/4 (0.0%)
0
Liver membrane
Specificity: 0.000
0/1 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples. Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501XSKYALHCRE11TGDLFVLQLK21GMHKMTPPIK31DLLPRLTPIL41KNRHEKVQEN
51-10051CIDLVGRIAD61RGAEYVSARE71WMRICFELLE81LLKAHKKAIR91RATVNTFGYI
101-150101AKAIGPHDVL111ATLLNNLKVQ121ERQNRVCTTV131AIAIVAETCS141PFTVLPALMN
151-200151EYRVPELNVQ161NGVLKSLSFL171FEYIGEMGKD181YIYAVTPLLE191DALMDRDLVH
201-241201RQTASAVVQH211MSLGVYGFGC221EDSLNHLLNY231VWPNVFETSP241H
Palmitoylation Sites Details
Position Sources Domains Experimental PMIDs
8 Prediction (Medium) - -
51 Prediction (Low) - -
75 CYSMODDB SWISSPALM DBPTM Prediction (Medium) - -
127 Prediction (Medium) - -
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
101 Y → C 0.001969 SNP Missense Mutation HNSC
286 S → C 0.001969 SNP Missense Mutation HNSC
397 R → C 0.002506 SNP Missense Mutation COAD
397 R → C 0.001887 SNP Missense Mutation UCEC
524 R → C 0.001887 SNP Missense Mutation UCEC
549 R → C 0.003774 SNP Missense Mutation UCEC
588 Y → C 0.002033 SNP Missense Mutation LUSC
625 R → C 0.002427 SNP Missense Mutation BLCA
625 R → C 0.004283 SNP Missense Mutation SKCM
625 R → C 0.075000 SNP Missense Mutation UVM
765 Y → C 0.001014 SNP Missense Mutation BRCA
765 Y → C 0.002033 SNP Missense Mutation LUSC
965 C → S 0.002033 SNP Missense Mutation LUSC
1035 C → G 0.001887 SNP Missense Mutation UCEC
1059 C → R 0.001014 SNP Missense Mutation BRCA
1297 R → C 0.002141 SNP Missense Mutation SKCM
1297 R → C 0.001887 SNP Missense Mutation UCEC