Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| H7C3S8 | NT5DC3 | 5'-nucleotidase domain containing 3 | Homo sapiens (Human) | 122 aa |
Protein Details: H7C3S8 (NT5DC3)
Protein Information
| Accession | H7C3S8 |
|---|---|
| Protein Names | 5'-nucleotidase domain containing 3 |
| Gene Symbol | NT5DC3 |
| Organism | Homo sapiens (Human) |
| Length | 122 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 32944167 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XTMTWLQTLT11GLLEQMQVHR21DAESQLVLQE31WKKERKEMRE41MTKSFFNAQF
51-10051GSLFRTDQNP61TYFLRRLSRF71ADIYMASLSC81LLNYDVSHTF91YPRRTPLQHE
101-122101LPAWSERPPT111FGTPLLQEAQ121AK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 80 | - | - | - |
Deep-Palm: 0.70
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
LNCaP
Specificity: 0.667
2/2 (100.0%)
1
PC3
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 148 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 229 | C → C | 0.002427 | SNP | Silent | BLCA |
| 305 | F → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 335 | F → C | 0.002294 | SNP | Missense Mutation | OV |
| 373 | F → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 403 | G → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 437 | G → C | 0.002033 | SNP | Missense Mutation | LUSC |
| 492 | R → C | 0.002033 | SNP | Missense Mutation | LUSC |