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Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
I3L3U8 LITAF Lipopolysaccharide induced TNF factor Homo sapiens (Human) 153 aa

Protein Details: I3L3U8 (LITAF)

Protein Information
AccessionI3L3U8
Protein NamesLipopolysaccharide induced TNF factor
Gene SymbolLITAF
OrganismHomo sapiens (Human)
Length153 aa
IsoformsNo isoforms
Related PMIDs No related PMIDs
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MSVPGPYQAA11TGPSSAPSAP21PSYEETVAVN31SYYPTPPAPM41PGPTTGLVTG
51-10051PDGKGMNPPS61YYTQPAPIPN71NNPITVQTVY81VQHPITFLDR91PIQMCCPSCN
101-150101KMIVSQLSYN111AGALTWLSCG121SLCLLGCIAG131CCFIPFCVDA141LQDVDHYCPN
151-153151CRA
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
95 - - -
GPS-Palm: 0.78
Deep-Palm: 0.04
96 - - -
GPS-Palm: 0.78
Deep-Palm: 0.04
99 - - -
Deep-Palm: 0.25
119 - - -
GPS-Palm: 0.68
Deep-Palm: 0.70
123 - - -
Deep-Palm: 0.64
127 - - -
GPS-Palm: 0.69
Deep-Palm: 0.53
131 - - -
GPS-Palm: 0.76
Deep-Palm: 0.13
132 - - -
GPS-Palm: 0.74
Deep-Palm: 0.20
137 SWISSPALM DBPTM CYSMODDB LITAF-like zinc ribbon domain
HeLa (29575903)
-
Deep-Palm: 0.33
148 - - -
GPS-Palm: 0.82
Deep-Palm: 0.01
151 - - -
GPS-Palm: 0.93
Deep-Palm: 0.01
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
TCGA Cysteine Mutation Information

Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.

Position Amino Acid Change Frequency Type Function Cancer Type
116 W → C 0.002747 SNP Missense Mutation LIHC
137 C → C 0.001887 SNP Silent UCEC
160 R → C 0.001887 SNP Missense Mutation UCEC