Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| I6L8B7 | FABP5 | Fatty acid binding protein 5 | Homo sapiens (Human) | 101 aa |
Protein Details: I6L8B7 (FABP5)
Protein Information
| Accession | I6L8B7 |
|---|---|
| Protein Names | Fatty acid binding protein 5 |
| Gene Symbol | FABP5 |
| Organism | Homo sapiens (Human) |
| Length | 101 aa |
| Isoforms | No isoforms |
| Related PMIDs | 32944167 36430497 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGAMAKPDCI11ITCDGKNLTI21KTESTLKTTQ31FSCTLGEKFE41ETTADGRKTQ
51-10051TVCNFTDGAL61VQHQEWDGKE71STITRKLKDG81KLVVECVMNN91VTCTRIYEKV
101-101101E
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | Calycin | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.02
|
|
| 13 | Calycin | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.77
|
|
| 33 | SWISSPALM DBPTM CYSMODDB | Intracellular lipid binding protein Calycin | - |
cerebral cortex
(36430497)
|
GPS-Palm: 0.76
Deep-Palm: 0.97
|
| 53 | - | - |
Unknown
(32651440)
|
Deep-Palm: 0.68
|
|
| 86 | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.89
Deep-Palm: 0.95
|
|
| 93 | - | - |
Unknown
(32651440)
|
GPS-Palm: 0.72
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
PC3
Specificity: 0.667
2/2 (100.0%)
1
cerebral cortex
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 43 | C → C | 0.002033 | SNP | Silent | LUSC |