Search Database

Select Protein (1 found)

UniProt ID Gene Symbol Protein Name Organism Length Action
J3KSC4 RAC3 Rac family small GTPase 3 Homo sapiens (Human) 130 aa

Protein Details: J3KSC4 (RAC3)

Protein Information
AccessionJ3KSC4
Protein NamesRac family small GTPase 3
Gene SymbolRAC3
OrganismHomo sapiens (Human)
Length130 aa
IsoformsNo isoforms
Related PMIDs 26876311 31251020
Database SourcesCysModDBdbPTMSwissPalm
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
1-501MVDGKPVNLG11LWDTAGQEDY21DRLRPLSYPQ31TDVFLICFSL41VSPASFENVR
51-10051AKWYPEVRHH61CPHTPILLVG71TKLDLRDDKD81TIERLRDKKL91APITYPQGLA
101-130101MAREIGSVKY111LECSALTQRG121LKTVFDEAIR
Palmitoylation Sites Details
Position Database Domains Literature (PMID/Cell-Tissue) Mass(PMID/Cell-Tissue) Prediction Scores
37 P-loop containing nucleoside triphosphate hydrolase small GTPase Rho family profile. Small GTPase Rho Small GTPase - -
Deep-Palm: 0.96
61 - - -
Deep-Palm: 0.98
113 SWISSPALM DBPTM CYSMODDB - -
cerebral cortex (36430497)
Unknown (32651440)
GPS-Palm: 0.93
Deep-Palm: 0.98
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
2
LNCaP
Specificity: 0.667
2/2 (100.0%)
1
frontal cortex
Specificity: 0.333
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID). Blue bars: Literature data, Orange bars: Mass Spectrometry data. The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.