Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| J3QLC7 | CD7 | CD7 molecule | Homo sapiens (Human) | 140 aa |
Protein Details: J3QLC7 (CD7)
Protein Information
| Accession | J3QLC7 |
|---|---|
| Protein Names | CD7 molecule |
| Gene Symbol | CD7 |
| Organism | Homo sapiens (Human) |
| Length | 140 aa |
| Isoforms | No isoforms |
| Related PMIDs | 32651440 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MHRLQLSDTG11TYTCQAITEV21NVYGSGTLVL31VTEEQSQGWH41RCSDAPPRAS
51-10051ALPAPPTGSA61LPDPQTASAL71PDPPAASALP81AALAVISFLL91GLGLGVACVL
101-140101ARTQIKKLCS111WRDKNSAACV121VYEDMSHSRC131NTLSSPNQYQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | Immunoglobulin-like fold Immunoglobulin-like domain superfamily | - | - |
Deep-Palm: 0.22
|
|
| 42 | - | - | - |
Deep-Palm: 0.89
|
|
| 98 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
|
| 109 | - | - | - |
Deep-Palm: 0.86
|
|
| 119 | - | - | - |
Deep-Palm: 0.23
|
|
| 130 | - | - | - |
Deep-Palm: 0.01
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Jurkat T cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 48 | C → C | 0.001764 | SNP | Silent | LUAD |
| 55 | R → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 103 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 124 | G → C | 0.001764 | SNP | Missense Mutation | LUAD |