Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| J3QP81 | Clasp1 | CLIP-associating protein 1 (Cytoplasmic linker-associated … | Mus musculus (Mouse) | 1459 aa |
Protein Details: J3QP81 (Clasp1)
Protein Information
| Accession | J3QP81 |
|---|---|
| Protein Names | CLIP-associating protein 1 (Cytoplasmic linker-associated protein 1) |
| Gene Symbol | Clasp1 |
| Organism | Mus musculus (Mouse) |
| Length | 1459 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEPRMESCLA11QVLQKDVGKR21LQVGQELIDY31FSDRQKSADL41EHDQTLLDKL
51-10051VDGLATSWVN61SSNYKVVLLG71MDILSALVTR81LQDRFKAQIG91TVLPSLIDRL
101-150101GDAKDSVREQ111DQTLLLKIMD121QAANPQYVWD131RMLGGFKHKN141FRTREGICLC
151-200151LIATLNASGA161QTLTLSKIVP171HICNLLGDPN181SQVRDAAINS191LVEIYRHVGE
201-250201RVRADLSKKG211LPQSRLNVIF221TKFDEVQKSG231NMIQSANEKN241FDDEDSVDGN
251-300251RPSSASSSSS261KAPSSSRRNV271NLGTTRRLMS281SSLGSKSSAA291KEGAGAVDEE
301-350301DFIKAFDDVP311VVQIYSSRDL321EESINKIREI331LSDDKHDWEQ341RVNALKKIRS
351-400351LLLAGAAEYD361NFFQHLRLLD371GAFKLSAKDL381RSQVVREACI391TLGHLSSVLG
401-450401NKFDHGAEAI411MPTIFNLIPN421SAKIMATSGV431VAVRLIIRHT441HIPRLIPVIT
451-500451SNCTSKSVAV461RRRCFEFLDL471LLQEWQTHSL481ERHISVLAET491IKKGIHDADS
501-550501EARIEARKCY511WGFHSHFSRE521AEHLYHTLES531SYQKALQSHL541KNSDSIVSLP
551-600551QSDRSSSSSQ561ESLNRPLSAK571RSPTGSTASR581GSTVSTKSVS591TTGSLQRSRS
601-650601DIDVNAAASA611KSKVSSSSGS621PAFSSAAALP631PGSYASLGRI641RTRRQSSGST
651-700651TNVASTPSDS661RGRSRAKVVS671QSQPGSRSSS681PGKLLGSGLA691GGSSRGPPVT
701-750701PSSEKRSKIP711RSQGCSRETS721PNRIGLDRFG731LGQSGRIPGS741VNAMRVLSTS
751-800751TDLEAAVADA761LLLGDARSKK771KPVRRRYEPY781GMYSDDDANS791DASSVCSERS
801-850801YGSRNGGIPH811YLRQTEDVAE821VLNHCASSNW831SERKEGLLGL841QNLLKSQRTL
851-900851SRVELKRLCE861IFTRMFADPH871SKVFSMFLET881LVDFIIIHKD891DLQDWLFVLL
901-950901TQLLKKMGAD911LLGSVQAKVQ921KALDVTRDSF931PFDQQFNILM941RFIVDQTQTP
951-1000951NLKVKVAILK961YIESLARQMD971PTDFVNSSET981RLAVSRIITW991TTEPKSSDVR
1001-10501001KAAQIVLISL1011FELNTPEFTM1021LLGALPKTFQ1031DGATKLLHNH1041LKNSSNTGVG
1051-11001051SPSNTIGRTP1061SRHPSSRTSP1071LTSPTNCSHG1081GLSPSMLDYD1091TENLNSEEIY
1101-11501101SSLRGVTEAI1111EKFSFRSQED1121LNEPIKRDGK1131KDCDIVSRDG1141GAASPATEGR
1151-12001151GGSEIEGGRM1161ALDNKTSLLN1171TQPPRAFPGP1181RAREYNPYPY1191SDTINTYDKT
1201-12501201ALKEAVFDDD1211MEQLRDVPID1221HSDLVADLLK1231ELSNHNERVE1241ERKGALLELL
1251-13001251KITREDSLGV1261WEEHFKTILL1271LLLETLGDKD1281HSIRALALRV1291LREILRNQPA
1301-13501301RFKNYAELTI1311MKTLEAHKDS1321HKEVVRAAEE1331AASTLASSIH1341PEQCIKVLCP
1351-14001351IIQTADYPIN1361LAAIKMQTKV1371VERITKESLL1381QLLVDIIPGL1391LQGYDNTESS
1401-14501401VRKASVFCLV1411AIYSVIGEDL1421KPHLAQLTGS1431KMKLLNLYIK1441RAQTTNSNSS
1451-14591451SSSDVSTHS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 8 | - | - | - |
Deep-Palm: 0.07
|
|
| 148 | - | - | - |
Deep-Palm: 0.86
|
|
| 150 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.81
|
|
| 173 | - | - | - |
Deep-Palm: 0.96
|
|
| 389 | - | - | - |
Deep-Palm: 0.97
|
|
| 453 | - | - |
Brain
(31311849)
|
GPS-Palm: 0.93
Deep-Palm: 0.89
|
|
| 464 | - | - | - |
Deep-Palm: 0.31
|
|
| 509 | - | - | - |
Deep-Palm: 0.42
|
|
| 715 | - | - | - |
Deep-Palm: 0.92
|
|
| 796 | - | - | - |
Deep-Palm: 0.18
|
|
| 825 | - | - | - |
Deep-Palm: 0.93
|
|
| 859 | - | - |
Brain
(31311849)
|
Deep-Palm: 0.97
|
|
| 1077 | - | - | - |
Deep-Palm: 0.75
|
|
| 1133 | - | - | - |
Deep-Palm: 0.88
|
|
| 1344 | - | - | - |
Deep-Palm: 0.90
|
|
| 1349 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.70
|
| 1408 | - | - | - |
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.100
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
9
Brain tissue (Mass)
Specificity: 0.900
9/56 (16.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.