Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| J3QQ67 | RPL18 | Ribosomal protein L18 | Homo sapiens (Human) | 190 aa |
Protein Details: J3QQ67 (RPL18)
Protein Information
| Accession | J3QQ67 |
|---|---|
| Protein Names | Ribosomal protein L18 |
| Gene Symbol | RPL18 |
| Organism | Homo sapiens (Human) |
| Length | 190 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31251020 31382980 32944167 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501XPQGVDIRHN11KDRKVRRKEP21KSQDIYLRLL31VKLYRFLARR41TNSTFNQVVL
51-10051KRLFMSRTNR61PPLSLSRMIR71KMKLPGRENK81TAVVVGTITD91DVRVQEVPKL
101-150101KVCALRVTSR111ARSRILRAGG121KILTFDQLAL131DSPKGCGTVL141LSGPRKGREV
151-190151YRHFGKAPGT161PHSHTKPYVR171SKGRKFERAR181GRRASRGYKN
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 103 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.98
|
|
| 136 | SWISSPALM DBPTM CYSMODDB | Ribosomal protein 60S L18 and 50S L18e |
HeLa
(29575903)
|
cerebral cortex
(36430497)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
PC3
Specificity: 0.429
3/3 (100.0%)
1
LNCaP
Specificity: 0.143
1/1 (100.0%)
1
U937 cell
Specificity: 0.143
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Cerebral Cortex (Mass)
Specificity: 0.286
2/4 (50.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.