Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| J3QSB4 | RPL13 | 60S ribosomal protein L13 | Homo sapiens (Human) | 126 aa |
Protein Details: J3QSB4 (RPL13)
Protein Information
| Accession | J3QSB4 |
|---|---|
| Protein Names | 60S ribosomal protein L13 |
| Gene Symbol | RPL13 |
| Organism | Homo sapiens (Human) |
| Length | 126 aa |
| Isoforms | No isoforms |
| Related PMIDs | 19137006 31251020 32944167 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPSRNGMVL11KPHFHKDWQR21RVATWFNQPA31RKIRRRKARQ41AKARRIAPRP
51-10051ASGPIRPIVR61CPTVRYHTKV71RAGRGFSLEE81LRVAGIHKKV91ARTIGISVDP
101-126101RRRNKSTESL111QANVQRLKEY121RSKLIL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 61 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.87
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
PC3
Specificity: 0.600
3/3 (100.0%)
1
LNCaP
Specificity: 0.200
1/1 (100.0%)
1
Jurkat T cell
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.