Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| L0R865 | GIT1 | Alternative protein GIT1 | Homo sapiens (Human) | 126 aa |
Protein Details: L0R865 (GIT1)
Protein Information
| Accession | L0R865 |
|---|---|
| Protein Names | Alternative protein GIT1 |
| Gene Symbol | GIT1 |
| Organism | Homo sapiens (Human) |
| Length | 126 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26876311 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGLTLAPLML11MAAHPLTMPG21RRGTMSWRKG31WLSANMSSLT41GWPSTSVDAS
51-10051RITRMGITSS61HRWLTDLGKS71ACLRALTYPN81WPKLLRRSCR91RSATGFLRNS
101-126101PWTCMTRWIE111EKMMQCGWLP121KTTALW
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 72 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.95
|
|
| 89 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.91
|
|
| 104 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.34
|
|
| 116 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
frontal cortex
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 398 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 504 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |