Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| L8E8V9 | GNB1 | Alternative protein GNB1 | Homo sapiens (Human) | 65 aa |
Protein Details: L8E8V9 (GNB1)
Protein Information
| Accession | L8E8V9 |
|---|---|
| Protein Names | Alternative protein GNB1 |
| Gene Symbol | GNB1 |
| Organism | Homo sapiens (Human) |
| Length | 65 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26876311 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKQCTNQCFE11NNDLRLSKLN21FKNFDCLPYW31VGLLLESHAV41EMLKSAYGTQ
51-6551SLGVLFLLRN61NLLQL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.93
Deep-Palm: 0.02
|
|
| 8 | - | - | - |
Deep-Palm: 0.02
|
|
| 26 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
frontal cortex
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 114 | C → C | 0.002294 | SNP | Silent | OV |
| 114 | C → C | 0.001887 | SNP | Silent | UCEC |
| 116 | G → C | 0.002288 | SNP | Missense Mutation | STAD |
| 191 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 283 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |