Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O00203 | AP3B1 | AP-3 complex subunit beta-1 (Adaptor … | Homo sapiens (Human) | 1094 aa |
Protein Details: O00203 (AP3B1)
Protein Information
| Accession | O00203 |
|---|---|
| Protein Names | AP-3 complex subunit beta-1 (Adaptor protein complex AP-3 subunit beta-1) (Adaptor-related protein complex 3 subunit beta-1) (Beta-3A-adaptin) (Clathrin assembly protein complex 3 beta-1 large chain) |
| Gene Symbol | AP3B1 |
| Organism | Homo sapiens (Human) |
| Length | 1094 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSNSFPYNE11QSGGGEATEL21GQEATSTISP31SGAFGLFSSD41LKKNEDLKQM
51-10051LESNKDSAKL61DAMKRIVGMI71AKGKNASELF81PAVVKNVASK91NIEIKKLVYV
101-150101YLVRYAEEQQ111DLALLSISTF121QRALKDPNQL131IRASALRVLS141SIRVPIIVPI
151-200151MMLAIKEASA161DLSPYVRKNA171AHAIQKLYSL181DPEQKEMLIE191VIEKLLKDKS
201-250201TLVAGSVVMA211FEEVCPDRID221LIHKNYRKLC231NLLVDVEEWG241QVVIIHMLTR
251-300251YARTQFVSPW261KEGDELEDNG271KNFYESDDDQ281KEKTDKKKKP291YTMDPDHRLL
301-350301IRNTKPLLQS311RNAAVVMAVA321QLYWHISPKS331EAGIISKSLV341RLLRSNREVQ
351-400351YIVLQNIATM361SIQRKGMFEP371YLKSFYVRST381DPTMIKTLKL391EILTNLANEA
401-450401NISTLLREFQ411TYVKSQDKQF421AAATIQTIGR431CATNILEVTD441TCLNGLVCLL
451-500451SNRDEIVVAE461SVVVIKKLLQ471MQPAQHGEII481KHMAKLLDSI491TVPVARASIL
501-550501WLIGENCERV511PKIAPDVLRK521MAKSFTSEDD531LVKLQILNLG541AKLYLTNSKQ
551-600551TKLLTQYILN561LGKYDQNYDI571RDRTRFIRQL581IVPNVKSGAL591SKYAKKIFLA
601-650601QKPAPLLESP611FKDRDHFQLG621TLSHTLNIKA631TGYLELSNWP641EVAPDPSVRN
651-700651VEVIELAKEW661TPAGKAKQEN671SAKKFYSESE681EEEDSSDSSS691DSESESGSES
701-750701GEQGESGEEG711DSNEDSSEDS721SSEQDSESGR731ESGLENKRTA741KRNSKAKGKS
751-800751DSEDGEKENE761KSKTSDSSND771ESSSIEDSSS781DSESESEPES791ESESRRVTKE
801-850801KEKKTKQDRT811PLTKDVSLLD821LDDFNPVSTP831VALPTPALSP841SLMADLEGLH
851-900851LSTSSSVISV861STPAFVPTKT871HVLLHRMSGK881GLAAHYFFPR891QPCIFGDKMV
901-950901SIQITLNNTT911DRKIENIHIG921EKKLPIGMKM931HVFNPIDSLE941PEGSITVSMG
951-1000951IDFCDSTQTA961SFQLCTKDDC971FNVNIQPPVG981ELLLPVAMSE991KDFKKEQGVL
1001-10501001TGMNETSAVI1011IAAPQNFTPS1021VIFQKVVNVA1031NVGAVPSGQD1041NIHRFAAKTV
1051-10941051HSGSLMLVTV1061ELKEGSTAQL1071IINTEKTVIG1081SVLLRELKPV1091LSQG
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 215 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.75
|
|
| 230 | - | - | - |
Deep-Palm: 0.79
|
|
| 431 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.77
|
|
| 442 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.87
|
|
| 448 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.79
Deep-Palm: 0.92
|
|
| 507 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.96
|
|
| 893 | - | - | - |
Deep-Palm: 0.57
|
|
| 954 | - | - | - |
Deep-Palm: 0.24
|
|
| 965 | - | - | - |
Deep-Palm: 0.08
|
|
| 970 | - | - | - |
Deep-Palm: 0.62
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 276 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 330 | S → C | 0.001969 | SNP | Missense Mutation | LGG |
| 548 | S → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 893 | C → C | 0.001887 | SNP | Silent | UCEC |
| 927 | G → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 970 | C → C | 0.002033 | SNP | Silent | LUSC |
| 1007 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 1033 | G → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 1066 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |