Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O00231-2 | PSMD11 | 26S proteasome non-ATPase regulatory subunit … | Homo sapiens (Human) | 423 aa |
Protein Details: O00231-2 (PSMD11)
Protein Information
| Accession | O00231-2 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 11 (26S proteasome regulatory subunit RPN6) (26S proteasome regulatory subunit S9) (26S proteasome regulatory subunit p44.5) |
| Gene Symbol | PSMD11 |
| Organism | Homo sapiens (Human) |
| Length | 423 aa |
| Isoforms | |
| Related PMIDs | 31251020 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAAAAVVEFQ11RAQSLLSTDR21EASIDILHSI31VKRDIQENDE41EAVQVKEQSI
51-10051LELGSLLAKT61GQAAELGGLL71KYVRPFLNSI81SKAKAARLVR91SLLDLFLDME
101-150101AATGQEVELC111LECIEWAKSE121KRTFLRQALE131ARLVSLYFDT141KRYQEALHLG
151-200151SQLLRELKKM161DDKALLVEVQ171LLESKTYHAL181SNLPKARAAL191TSARTTANAI
201-250201YCPPKLQATL211DMQSGIIHAA221EEKDWKTAYS231YFYEAFEGYD241SIDSPKAITS
251-300251LKYMLLCKIM261LNTPEDVQAL271VSGKLALRYA281GRQTEALKCV291AQASKNRSLA
301-350301DFEKALTDYR311AELRDDPIIS321THLAKLYDNL331LEQNLIRVIE341PFSRVQIEHI
351-400351SSLIKLSKAD361VERKLSQMIL371DKKFHAGILD381QGEGVLIIFD391EPPVDKTYEA
401-423401ALETIQNMSK411VVDSLYNKAK421KLT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 110 | - | - | - |
Deep-Palm: 0.76
|
|
| 113 | - | - | - |
Deep-Palm: 0.74
|
|
| 202 | - | - | - |
Deep-Palm: 0.95
|
|
| 257 | - | - | - |
Deep-Palm: 0.94
|
|
| 289 | - | - | - |
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
LNCaP
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 126 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 192 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 289 | C → C | 0.003774 | SNP | Silent | UCEC |
| 309 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |