Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O00311 | CDC7 | Cell division cycle 7-related protein … | Homo sapiens (Human) | 574 aa |
Protein Details: O00311 (CDC7)
Protein Information
| Accession | O00311 |
|---|---|
| Protein Names | Cell division cycle 7-related protein kinase (CDC7-related kinase) (HsCdc7) (huCdc7) (EC 2.7.11.1) |
| Gene Symbol | CDC7 |
| Organism | Homo sapiens (Human) |
| Length | 574 aa |
| Isoforms | No isoforms |
| Related PMIDs | No related PMIDs |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MEASLGIQMD11EPMAFSPQRD21RFQAEGSLKK31NEQNFKLAGV41KKDIEKLYEA
51-10051VPQLSNVFKI61EDKIGEGTFS71SVYLATAQLQ81VGPEEKIALK91HLIPTSHPIR
101-150101IAAELQCLTV111AGGQDNVMGV121KYCFRKNDHV131VIAMPYLEHE141SFLDILNSLS
151-200151FQEVREYMLN161LFKALKRIHQ171FGIVHRDVKP181SNFLYNRRLK191KYALVDFGLA
201-250201QGTHDTKIEL211LKFVQSEAQQ221ERCSQNKSHI231ITGNKIPLSG241PVPKELDQQS
251-300251TTKASVKRPY261TNAQIQIKQG271KDGKEGSVGL281SVQRSVFGER291NFNIHSSISH
301-350301ESPAVKLMKQ311SKTVDVLSRK321LATKKKAIST331KVMNSAVMRK341TASSCPASLT
351-400351CDCYATDKVC361SICLSRRQQV371APRAGTPGFR381APEVLTKCPN391QTTAIDMWSA
401-450401GVIFLSLLSG411RYPFYKASDD421LTALAQIMTI431RGSRETIQAA441KTFGKSILCS
451-500451KEVPAQDLRK461LCERLRGMDS471STPKLTSDIQ481GHASHQPAIS491EKTDHKASCL
501-550501VQTPPGQYSG511NSFKKGDSNS521CEHCFDEYNT531NLEGWNEVPD541EAYDLLDKLL
551-574551DLNPASRITA561EEALLHPFFK571DMSL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 107 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.88
|
|
| 123 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.28
|
|
| 223 | - | - | - |
Deep-Palm: 0.77
|
|
| 345 | - | - | - |
Deep-Palm: 0.49
|
|
| 351 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.66
|
|
| 353 | - |
HeLa
(37611173)
| - |
Deep-Palm: 0.56
|
|
| 360 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.72
Deep-Palm: 0.56
|
|
| 363 | - | - | - |
GPS-Palm: 0.91
Deep-Palm: 0.50
|
|
| 388 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.79
|
|
| 449 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.96
|
|
| 462 | - | - | - |
GPS-Palm: 0.76
Deep-Palm: 0.98
|
|
| 499 | - | - | - |
Deep-Palm: 0.55
|
|
| 521 | - | - | - |
Deep-Palm: 0.02
|
|
| 524 | - | - | - |
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 26 | G → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 107 | C → S | 0.001764 | SNP | Missense Mutation | LUAD |
| 167 | R → C | 0.003774 | SNP | Missense Mutation | UCEC |
| 188 | R → C | 0.002288 | SNP | Missense Mutation | STAD |
| 188 | R → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 188 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 284 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 367 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |