Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08585 | Clta | Clathrin light chain A (Lca) | Mus musculus (Mouse) | 235 aa |
Protein Details: O08585 (Clta)
Protein Information
| Accession | O08585 |
|---|---|
| Protein Names | Clathrin light chain A (Lca) |
| Gene Symbol | Clta |
| Organism | Mus musculus (Mouse) |
| Length | 235 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29733200 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAELDPFGAP11AGAPGGPALG21NGVAGAGEED31PAAAFLAQQE41SEIAGIENDE
51-10051AFAILDGGAP61GRATRRAAGG71PDAVDGVMNG81EYYQESNGPT91DSYAAISEVD
101-150101RLQSEPESIR111KWREEQTERL121EALDANSRKQ131EAEWKEKAIK141ELEEWYARQD
151-200151EQLQKTKANN161RVADEAFYKQ171PFADLIGYVA181AEEAFVNDID191ESSPGTEWER
201-235201VARLCDFNPK211SSKQAKDVSR221MRSVLISLKQ231APLVH
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 205 | Clathrin light chain |
Brain
(34200797)
|
Brain
(35358180)
|
GPS-Palm: 0.91
Deep-Palm: 0.95
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.600
3
Brain
Specificity: 0.375
3/3 (100.0%)
1
Raw 264.7
Specificity: 0.125
1/1 (100.0%)
1
Liver
Specificity: 0.125
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.375
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.