Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08688 | Capn5; Ncl3 | Calpain-5 (EC 3.4.22.-) (New calpain … | Mus musculus (Mouse) | 640 aa |
Protein Details: O08688 (Capn5)
Protein Information
| Accession | O08688 |
|---|---|
| Protein Names | Calpain-5 (EC 3.4.22.-) (New calpain 3) (nCL-3) |
| Gene Symbol | Capn5; Ncl3 |
| Organism | Mus musculus (Mouse) |
| Length | 640 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28680068 29660268 29733200 31311849 35358180 37925639 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.625
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
10
Brain tissue
Specificity: 0.625
10/12 (83.3%)
6
Liver tissue
Specificity: 0.375
6/19 (31.6%)
0
Macrophage Raw 264.7
Specificity: 0.000
0/2 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MFSCAKAYED11QNYSALKRAC21LRKKVLFEDP31LFPATDDSLY41YKGTPGPTVR
51-10051WKRPKDICDD61PRLFVDGISS71HDLHQGQVGN81CWFVAACSSL91ASRESLWQKV
101-150101IPDWKEQEWN111PEKPDSYAGI121FHFNFWRFGE131WVDVIVDDRL141PTVNNQLIYC
151-200151HSNSKNEFWC161ALVEKAYAKL171AGCYQALDGG181NTADALVDFT191GGVSEPIDLT
201-250201EGDLATDEAK211RNQLFERVLK221VHSRGGLISA231SIKAVTAADM241EARLACGLVK
251-300251GHAYAVTDVR261KVRLGHGLLA271FFKSEKLDMI281RLRNPWGERE291WTGPWSDTSE
301-350301EWQKVSKSER311EKMGVTVQDD321GEFWMTFEDM331CRYFTDIIKC341RLINTSYLSI
351-400351HKTWEEARLH361GAWTRHEDPQ371QNRSGGCINH381KDTFFQNPQY391VFEVKKPEDE
401-450401VLISIQQRPK411RSTRREGKGE421NLAIGFDIYK431VEENRQYRMH441SLQHKAASSI
451-500451YINSRSVFLR461TELPEGRYVI471IPTTFEPGHT481GEFLLRVFTD491VPSNCRELRL
501-550501DEPPRTCWSS511LCGYPQQVAQ521VHVLGAAGLK531DSPTGANSYV541IIKCEGEKVR
551-600551SAVQRGTSTP561EYNVKGIFYR571KKLAQPITVQ581VWNHRVLKDE591FLGQVHLKTA
601-640601PDDLQDLHTL611HLQDRSSRQP621SDLPGIVAVR631VLCSASLTAV
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 4 | Prediction (High) | - | - |
| 20 | Prediction (High) | - | - |
| 173 | Experimental | Calpain family cysteine protease | 35358180 |
| 495 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28680068 |
| 507 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28680068, 31311849 |
| 512 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28680068, 31311849 |
| 633 | Prediction (High) | - | - |