Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08709 | Prdx6 | Peroxiredoxin-6 (EC 1.11.1.27) (1-Cys peroxiredoxin) … | Mus musculus (Mouse) | 224 aa |
Protein Details: O08709 (Prdx6)
Protein Information
| Accession | O08709 |
|---|---|
| Protein Names | Peroxiredoxin-6 (EC 1.11.1.27) (1-Cys peroxiredoxin) (1-Cys PRX) (Acidic calcium-independent phospholipase A2) (aiPLA2) (EC 3.1.1.4) (Antioxidant protein 2) (Glutathione-dependent peroxiredoxin) (Lysophosphatidylcholine acyltransferase 5) (LPC acyltransferase 5) (LPCAT-5) (Lyso-PC acyltransferase 5) (EC 2.3.1.23) (Non-selenium glutathione peroxidase) (NSGPx) |
| Gene Symbol | Prdx6 |
| Organism | Mus musculus (Mouse) |
| Length | 224 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPGGLLLGDE11APNFEANTTI21GRIRFHDFLG31DSWGILFSHP41RDFTPVCTTE
51-10051LGRAAKLAPE61FAKRNVKLIA71LSIDSVEDHL81AWSKDINAYN91GETPTEKLPF
101-150101PIIDDKGRDL111AILLGMLDPV121EKDDNNMPVT131ARVVFIFGPD141KKLKLSILYP
151-200151ATTGRNFDEI161LRVVDSLQLT171GTKPVATPVD181WKKGESVMVV191PTLSEEEAKQ
201-224201CFPKGVFTKE211LPSGKKYLRY221TPQP
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 47 | SWISSPALM DBPTM CYSMODDB | Thioredoxin-like superfamily Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant AhpC/TSA family Glutaredoxin |
liver
(26165157)
brain
(39008777)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.96
|
| 201 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.97
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
6
Liver
Specificity: 0.136
6/6 (100.0%)
3
Brain
Specificity: 0.068
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
35
Brain tissue (Mass)
Specificity: 0.795
35/56 (62.5%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.