Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08738 | Casp6 | Caspase-6 (CASP-6) (EC 3.4.22.59) (Apoptotic … | Mus musculus (Mouse) | 276 aa |
Protein Details: O08738 (Casp6)
Protein Information
| Accession | O08738 |
|---|---|
| Protein Names | Caspase-6 (CASP-6) (EC 3.4.22.59) (Apoptotic protease Mch-2) [Cleaved into: Caspase-6 subunit p18; Caspase-6 subunit p11] |
| Gene Symbol | Casp6 |
| Organism | Mus musculus (Mouse) |
| Length | 276 aa |
| Isoforms | No isoforms |
| Related PMIDs | 35477839 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MTETDGFYKS11REVFDPAEQY21KMDHKRRGVA31LIFNHERFFW41HLTLPERRGT
51-10051NADRDNLTRR61FSDLGFEVKC71FNDLRAEELL81LKIHEVSTSS91HIDADCFICV
101-150101FLSHGEGNHV111YAYDAKIEIQ121TLTGLFKGDK131CQSLVGKPKI141FIIQACRGSQ
151-200151HDVPVVPLDM161VDHQTDKLDN171VTQVDAASVY181TLPAGADFLM191CYSVAEGYYS
201-250201HRETVNGSWY211IQDLCEMLAR221YGSSLEFTEL231LTLVNRKVSQ241RRVDFCKDPD
251-276251AIGKKQVPCF261ASMLTKKLHF271CPKPSK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 70 | SWISSPALM DBPTM CYSMODDB | Caspase domain |
liver
(26165157)
| - |
GPS-Palm: 0.69
Deep-Palm: 0.98
|
| 96 | - | - | - |
Deep-Palm: 0.03
|
|
| 99 | - | - | - |
Deep-Palm: 0.03
|
|
| 131 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.95
|
|
| 146 | Caspase domain |
MLE
(39008777)
| - |
GPS-Palm: 0.90
Deep-Palm: 0.89
|
|
| 191 | - | - | - |
Deep-Palm: 0.88
|
|
| 215 | - | - | - |
Deep-Palm: 0.76
|
|
| 246 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.93
|
|
| 259 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.55
|
|
| 271 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.02
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.