Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08810 | Eftud2; Snrp116 | 116 kDa U5 small nuclear … | Mus musculus (Mouse) | 971 aa |
Protein Details: O08810 (Eftud2)
Protein Information
| Accession | O08810 |
|---|---|
| Protein Names | 116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain-containing protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) |
| Gene Symbol | Eftud2; Snrp116 |
| Organism | Mus musculus (Mouse) |
| Length | 971 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 34884899 37925639 39008777 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
6
Liver tissue
Specificity: 0.462
6/19 (31.6%)
6
Liver membrane
Specificity: 0.462
6/6 (100.0%)
1
Macrophage Raw 264.7
Specificity: 0.077
1/2 (50.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Neural Stem Cells
Specificity: 0.000
0/3 (0.0%)
0
Testis
Specificity: 0.000
0/2 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MDTDLYDEFG11NYIGPELDSD21EDDDELGRET31KDLDEDEDED41EDDVGEHEDD
51-10051HPGMEVVLHE61DKKYYPTAEE71VYGPEVETIV81QEEDTQPLTE91PIIKPVKTKK
101-150101FTLMEQTLPV111TVYEMDFLAD121LMDNSELIRN131VTLCGHLHHG141KTCFVDCLIE
151-200151QTHPEIRKRY161DQDLCYTDIL171FTEQERGVGI181KSTPVTVVLP191DTKGKSYLFN
201-250201IMDTPGHVNF211SDEVTAGLRI221SDGVVLFIDA231AEGVMLNTER241LIKHAVQERL
251-300251AVTVCINKID261RLILELKLPP271TDAYYKLRHI281VDEVNGLISM291YSTDENLILS
301-350301PLLGNVCFSS311SQYSICFTLG321SFAKIYADTF331GDINYQEFAK341RLWGDIYFNP
351-400351KTRKFTKKAP361SSSSQRSFVE371FILEPLYKIL381AQVVGDVDTS391LPRTLDELGI
401-450401HLTKEELKLN411IRPLLRLVCK421KFFGEFTGFV431DMCVQHIPSP441KVGAKPKIEH
451-500451TYTGGVDSDL461GEAMSDCDPD471GPLMCHTTKM481YSTDDGVQFH491AFGRVLSGTI
501-550501HAGQPVKVLG511ENYTLEDEED521SQICTVGRLW531ISVARYHIEV541NRVPAGNWVL
551-600551IEGVDQPIVK561TATITEPRGN571EEAQIFRPLK581FNTTSVIKIA591VEPVNPSELP
601-650601KMLDGLRKVN611KSYPSLTTKV621EESGEHVILG631TGELYLDCVM641HDLRKMYSEI
651-700651DIKVADPVVT661FCETVVETSS671LKCFAETPNK681KNKITMIAEP691LEKGLAEDIE
701-750701NEVVQITWNR711KKLGEFFQTK721YDWDLLAARS731IWAFGPDATG741PNILVDDTLP
751-800751SEVDKALLGS761VKDSIVQGFQ771WGTREGPLCD781ELIRNVKFKI791LDAVVAQEPL
801-850801HRGGGQIIPT811ARRVVYSAFL821MATPRLMEPY831YFVEVQAPAD841CVSAVYTVLA
851-900851RRRGHVTQDA861PIPGSPLYTI871KAFIPAIDSF881GFETDLRTHT891QGQAFSLSVF
901-950901HHWQIVPGDP911LDKSIVIRPL921EPQPAPHLAR931EFMIKTRRRK941GLSEDVSISK
951-971951FFDDPMLLEL961AKQDVVLNYP971M
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 255 | Prediction (High) | - | - |
| 779 | Experimental Prediction (High) | Elongation factor G domain IV | 39008777 |