Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O08810 | Eftud2 | 116 kDa U5 small nuclear … | Mus musculus (Mouse) | 971 aa |
Protein Details: O08810 (Eftud2)
Protein Information
| Accession | O08810 |
|---|---|
| Protein Names | 116 kDa U5 small nuclear ribonucleoprotein component (Elongation factor Tu GTP-binding domain-containing protein 2) (U5 snRNP-specific protein, 116 kDa) (U5-116 kDa) |
| Gene Symbol | Eftud2 |
| Organism | Mus musculus (Mouse) |
| Length | 971 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34884899 |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDTDLYDEFG11NYIGPELDSD21EDDDELGRET31KDLDEDEDED41EDDVGEHEDD
51-10051HPGMEVVLHE61DKKYYPTAEE71VYGPEVETIV81QEEDTQPLTE91PIIKPVKTKK
101-150101FTLMEQTLPV111TVYEMDFLAD121LMDNSELIRN131VTLCGHLHHG141KTCFVDCLIE
151-200151QTHPEIRKRY161DQDLCYTDIL171FTEQERGVGI181KSTPVTVVLP191DTKGKSYLFN
201-250201IMDTPGHVNF211SDEVTAGLRI221SDGVVLFIDA231AEGVMLNTER241LIKHAVQERL
251-300251AVTVCINKID261RLILELKLPP271TDAYYKLRHI281VDEVNGLISM291YSTDENLILS
301-350301PLLGNVCFSS311SQYSICFTLG321SFAKIYADTF331GDINYQEFAK341RLWGDIYFNP
351-400351KTRKFTKKAP361SSSSQRSFVE371FILEPLYKIL381AQVVGDVDTS391LPRTLDELGI
401-450401HLTKEELKLN411IRPLLRLVCK421KFFGEFTGFV431DMCVQHIPSP441KVGAKPKIEH
451-500451TYTGGVDSDL461GEAMSDCDPD471GPLMCHTTKM481YSTDDGVQFH491AFGRVLSGTI
501-550501HAGQPVKVLG511ENYTLEDEED521SQICTVGRLW531ISVARYHIEV541NRVPAGNWVL
551-600551IEGVDQPIVK561TATITEPRGN571EEAQIFRPLK581FNTTSVIKIA591VEPVNPSELP
601-650601KMLDGLRKVN611KSYPSLTTKV621EESGEHVILG631TGELYLDCVM641HDLRKMYSEI
651-700651DIKVADPVVT661FCETVVETSS671LKCFAETPNK681KNKITMIAEP691LEKGLAEDIE
701-750701NEVVQITWNR711KKLGEFFQTK721YDWDLLAARS731IWAFGPDATG741PNILVDDTLP
751-800751SEVDKALLGS761VKDSIVQGFQ771WGTREGPLCD781ELIRNVKFKI791LDAVVAQEPL
801-850801HRGGGQIIPT811ARRVVYSAFL821MATPRLMEPY831YFVEVQAPAD841CVSAVYTVLA
851-900851RRRGHVTQDA861PIPGSPLYTI871KAFIPAIDSF881GFETDLRTHT891QGQAFSLSVF
901-950901HHWQIVPGDP911LDKSIVIRPL921EPQPAPHLAR931EFMIKTRRRK941GLSEDVSISK
951-971951FFDDPMLLEL961AKQDVVLNYP971M
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 134 | - | - | - |
Deep-Palm: 0.62
|
|
| 143 | - | - | - |
Deep-Palm: 0.47
|
|
| 147 | - | - | - |
Deep-Palm: 0.35
|
|
| 165 | - | - | - |
Deep-Palm: 0.54
|
|
| 255 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.97
|
|
| 307 | - | - | - |
Deep-Palm: 0.92
|
|
| 316 | - | - | - |
Deep-Palm: 0.55
|
|
| 419 | - | - | - |
Deep-Palm: 0.97
|
|
| 433 | - | - | - |
Deep-Palm: 0.56
|
|
| 467 | - | - | - |
Deep-Palm: 0.12
|
|
| 475 | - | - | - |
Deep-Palm: 0.04
|
|
| 524 | - | - | - |
Deep-Palm: 0.89
|
|
| 638 | - | - | - |
Deep-Palm: 0.93
|
|
| 662 | - | - | - |
Deep-Palm: 0.76
|
|
| 673 | - | - | - |
Deep-Palm: 0.71
|
|
| 779 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.91
|
|
| 841 | - | - | - |
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Liver
Specificity: 1.000
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.