Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O09044 | Snap23 | Synaptosomal-associated protein 23 (SNAP-23) (Syndet) … | Mus musculus (Mouse) | 210 aa |
Protein Details: O09044 (Snap23)
Protein Information
| Accession | O09044 |
|---|---|
| Protein Names | Synaptosomal-associated protein 23 (SNAP-23) (Syndet) (Vesicle-membrane fusion protein SNAP-23) |
| Gene Symbol | Snap23 |
| Organism | Mus musculus (Mouse) |
| Length | 210 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29575903 29733200 34884899 35358180 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MDNLSPEEVQ11LRAHQVTDES21LESTRRILGL31AIESQDAGIK41TITMLDEQGE
51-10051QLNRIEEGMD61QINKDMREAE71KTLTELNKCC81GLCICPCNRT91KNFESGKNYK
101-150101ATWGDGGDNS111PSNVVSKQPS121RITNGQPQQT131TGAASGGYIK141RITNDAREDE
151-200151MEENLTQVGS161ILGNLKNMAL171DMGNEIDAQN181QQIQKITEKA191DTNKNRIDIA
201-210201NTRAKKLIDS
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 79 | DBPTM SWISSPALM | SNAP-25 family |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.79
Deep-Palm: 0.65
|
| 80 | DBPTM SWISSPALM | SNAP-25 family |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.95
Deep-Palm: 0.69
|
| 83 | DBPTM SWISSPALM | SNAP-25 family |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.71
|
| 85 | DBPTM SWISSPALM | SNAP-25 family |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.38
|
| 87 | SNAP-25 family |
MLE
(39008777)
|
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.27
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.455
5
Liver
Specificity: 0.227
5/5 (100.0%)
4
Raw 264.7
Specificity: 0.182
4/4 (100.0%)
2
Brain
Specificity: 0.091
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.500
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.