Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O15439-2 | ABCC4 | ATP-binding cassette sub-family C member … | Homo sapiens (Human) | 1278 aa |
Protein Details: O15439-2 (ABCC4)
Protein Information
| Accession | O15439-2 |
|---|---|
| Protein Names | ATP-binding cassette sub-family C member 4 (EC 7.6.2.-) (EC 7.6.2.2) (EC 7.6.2.3) (MRP/cMOAT-related ABC transporter) (Multi-specific organic anion transporter B) (MOAT-B) (Multidrug resistance-associated protein 4) |
| Gene Symbol | ABCC4 |
| Organism | Homo sapiens (Human) |
| Length | 1278 aa |
| Isoforms | |
| Related PMIDs | 31251020 33636221 |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MLPVYQEVKP11NPLQDANLCS21RVFFWWLNPL31FKIGHKRRLE41EDDMYSVLPE
51-10051DRSQHLGEEL61QGFWDKEVLR71AENDAQKPSL81TRAIIKCYWK91SYLVLGIFTL
101-150101IEESAKVIQP111IFLGKIINYF121ENYDPMDSVA131LNTAYAYATV141LTFCTLILAI
151-200151LHHLYFYHVQ161CAGMRLRVAM171CHMIYRKALR181LSNMAMGKTT191TGQIVNLLSN
201-250201DVNKFDQVTV211FLHFLWAGPL221QAIAVTALLW231MEIGISCLAG241MAVLIILLPL
251-300251QSCFGKLFSS261LRSKTATFTD271ARIRTMNEVI281TGIRIIKMYA291WEKSFSNLIT
301-350301NLRKKEISKI311LRSSCLRGMN321LASFFSASKI331IVFVTFTTYV341LLGSVITASR
351-400351VFVAVTLYGA361VRLTVTLFFP371SAIERVSEAI381VSIRRIQTFL391LLDEISQRNR
401-450401QLPSDGKKMV411HVQDFTAFWD421KASETPTLQG431LSFTVRPGEL441LAVVGPVGAG
451-500451KSSLLSAVLG461ELAPSHGLVS471VHGRIAYVSQ481QPWVFSGTLR491SNILFGKKYE
501-550501KERYEKVIKA511CALKKDLQLL521EDGDLTVIGD531RGTTLSGGQK541ARVNLARAVY
551-600551QDADIYLLDD561PLSAVDAEVS571RHLFELCICQ581ILHEKITILV591THQLQYLKAA
601-650601SQILILKDGK611MVQKGTYTEF621LKSGIDFGSL631LKKDNEESEQ641PPVPGTPTLR
651-700651NRTFSESSVW661SQQSSRPSLK671DGALESQDVA681YVLQDWWLSY691WANKQSMLNV
701-750701TVNGGGNVTE711KLDLNWYLGI721YSGLTVATVL731FGIARSLLVF741YVLVNSSQTL
751-800751HNKMFESILK761APVLFFDRNP771IGRILNRFSK781DIGHLDDLLP791LTFLDFIQTL
801-850801LQVVGVVSVA811VAVIPWIAIP821LVPLGIIFIF831LRRYFLETSR841DVKRLESTTR
851-900851SPVFSHLSSS861LQGLWTIRAY871KAEERCQELF881DAHQDLHSEA891WFLFLTTSRW
901-950901FAVRLDAICA911MFVIIVAFGS921LILAKTLDAG931QVGLALSYAL941TLMGMFQWCV
951-1000951RQSAEVENMM961ISVERVIEYT971DLEKEAPWEY981QKRPPPAWPH991EGVIIFDNVN
1001-10501001FMYSPGGPLV1011LKHLTALIKS1021QEKVGIVGRT1031GAGKSSLISA1041LFRLSEPEGK
1051-11001051IWIDKILTTE1061IGLHDLRKKM1071SIIPQEPVLF1081TGTMRKNLDP1091FNEHTDEELW
1101-11501101NALQEVQLKE1111TIEDLPGKMD1121TELAESGSNF1131SVGQRQLVCL1141ARAILRKNQI
1151-12001151LIIDEATANV1161DPRTDELIQK1171KIREKFAHCT1181VLTIAHRLNT1191IIDSDKIMVL
1201-12501201DSGRLKEYDE1211PYVLLQNKES1221LFYKMVQQLG1231KAEAAALTET1241AKQVYFKRNY
1251-12781251PHIGHTDHMV1261TNTSNGQPST1271LTIFETAL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 19 | - | - | - |
Deep-Palm: 0.93
|
|
| 87 | - | - | - |
Deep-Palm: 0.86
|
|
| 144 | - | - | - |
Deep-Palm: 0.18
|
|
| 161 | - | - | - |
Deep-Palm: 0.08
|
|
| 171 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.77
|
|
| 237 | - | - | - |
Deep-Palm: 0.94
|
|
| 253 | - | - | - |
GPS-Palm: 0.90
Deep-Palm: 0.98
|
|
| 315 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.96
|
|
| 511 | - | - | - |
Deep-Palm: 0.98
|
|
| 577 | - | - | - |
Deep-Palm: 0.95
|
|
| 579 | - | - | - |
Deep-Palm: 0.95
|
|
| 923 | - | - | - |
Deep-Palm: 0.85
|
|
| 956 | - | - | - |
Deep-Palm: 0.51
|
|
| 996 | - | - | - |
Deep-Palm: 0.31
|
|
| 1139 | - | - | - |
GPS-Palm: 0.90
|
|
| 1186 | - | - | - |
Deep-Palm: 0.98
|
|
| 1226 | - | - | - |
Deep-Palm: 0.94
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.800
4
LNCaP
Specificity: 0.800
4/4 (100.0%)
1
heart
Specificity: 0.200
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 144 | C → C | 0.001887 | SNP | Silent | UCEC |
| 180 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 314 | S → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 315 | C → S | 0.002288 | SNP | Missense Mutation | STAD |
| 350 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 400 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 550 | Y → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 664 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 824 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 891 | R → C | 0.001969 | SNP | Missense Mutation | LGG |
| 947 | W → C | 0.002976 | SNP | Missense Mutation | KIRC |
| 996 | C → G | 0.002141 | SNP | Missense Mutation | SKCM |
| 1138 | F → C | 0.002545 | SNP | Missense Mutation | GBM |
| 1270 | Y → C | 0.001887 | SNP | Missense Mutation | UCEC |