Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35215 | Ddt | D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome … | Mus musculus (Mouse) | 118 aa |
Protein Details: O35215 (Ddt)
Protein Information
| Accession | O35215 |
|---|---|
| Protein Names | D-dopachrome decarboxylase (EC 4.1.1.84) (D-dopachrome tautomerase) |
| Gene Symbol | Ddt |
| Organism | Mus musculus (Mouse) |
| Length | 118 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MPFVELETNL11PASRIPAGLE21NRLCAATATI31LDKPEDRVSV41TIRPGMTLLM
51-10051NKSTEPCAHL61LVSSIGVVGT71AEQNRTHSAS81FFKFLTEELS91LDQDRIVIRF
101-118101FPLEAWQIGK111KGTVMTFL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 24 | SWISSPALM DBPTM CYSMODDB | Tautomerase/MIF superfamily Macrophage migration inhibitory factor (MIF) Macrophage migration inhibitory factor |
liver
(26165157)
Liver
(28526873)
|
Brain
(35358180)
|
GPS-Palm: 0.93
Deep-Palm: 0.98
|
| 57 | SWISSPALM DBPTM CYSMODDB | Macrophage migration inhibitory factor (MIF) |
Liver
(28526873)
|
Liver
(37925639)
Brain
(35358180)
|
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.667
4
Liver
Specificity: 0.133
4/4 (100.0%)
2
Brain
Specificity: 0.067
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.750
18
Brain tissue (Mass)
Specificity: 0.600
18/56 (32.1%)
6
Liver tissue (Mass)
Specificity: 0.200
6/8 (75.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.