Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35226-2 | Psmd4 | 26S proteasome non-ATPase regulatory subunit … | Mus musculus (Mouse) | 379 aa |
Protein Details: O35226-2 (Psmd4)
Protein Information
| Accession | O35226-2 |
|---|---|
| Protein Names | 26S proteasome non-ATPase regulatory subunit 4 (26S proteasome regulatory subunit RPN10) (26S proteasome regulatory subunit S5A) (Multiubiquitin chain-binding protein) |
| Gene Symbol | Psmd4 |
| Organism | Mus musculus (Mouse) |
| Length | 379 aa |
| Isoforms | |
| Related PMIDs | 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | No database sources |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MVLESTMVCV11DNSEYMRNGD21FLPTRLQAQQ31DAVNIVCHSK41TRSNPENNVG
51-10051LITLANDCEV61LTTLTPDTGR71ILSKLHTVQP81KGKITFCTGI91RVAHLALKHR
101-150101QGKNHKMRII111AFVGSPVEDN121EKDLVKLAKR131LKKEKVNVDI141INFGEEEVNT
151-200151EKLTAFVNTL161NGKDGTGSHL171VTVPPGPSLA181DALISSPILA191GEGGAMLGLG
201-250201ASDFEFGVDP211SADPELALAL221RVSMEEQRQR231QEEEARRAAA241ASAAEAGIAT
251-300251PGTEGERDSD261DALLKMTINQ271QEFGRPGLPD281LSSMTEEEQI291AYAMQMSLQG
301-350301TEFSQESADM311DASSAMDTSD321PVKEEDDYDV331MQDPEFLQSV341LENLPGVDPN
351-379351NAAIRSVMGA361LASQATKDGK371NDKKEEEKK
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 9 | 26S proteasome non-ATPase regulatory subunit 4 von Willebrand factor, type A von Willebrand factor A-like domain superfamily | - | - |
Deep-Palm: 0.01
|
|
| 37 | 26S proteasome non-ATPase regulatory subunit 4 von Willebrand factor A-like domain superfamily von Willebrand factor, type A | - |
Brain
(35358180)
|
Deep-Palm: 0.82
|
|
| 58 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.91
|
|
| 87 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.90
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
2
Testis
Specificity: 0.118
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
15
Brain tissue (Mass)
Specificity: 0.882
15/56 (26.8%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.