Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35393 | Efnb3 | Ephrin-B3 | Mus musculus (Mouse) | 340 aa |
Protein Details: O35393 (Efnb3)
Protein Information
| Accession | O35393 |
|---|---|
| Protein Names | Ephrin-B3 |
| Gene Symbol | Efnb3 |
| Organism | Mus musculus (Mouse) |
| Length | 340 aa |
| Isoforms | No isoforms |
| Related PMIDs | 34200797 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGAPHFGPGG11VQVGALLLLG21FAGLVSGLSL31EPVYWNSANK41RFQAEGGYVL
51-10051YPQIGDRLDL61LCPRARPPGP71HSSPSYEFYK81LYLVEGAQGR91RCEAPPAPNL
101-150101LLTCDRPDLD111LRFTIKFQEY121SPNLWGHEFR131SHHDYYIIAT141SDGTREGLES
151-200151LQGGVCLTRG161MKVLLRVGQS171PRGGAVPRKP181VSEMPMERDR191GAAHSAEPGR
201-250201DTIPGDPSSN211ATSRGAEGPL221PPPSMPAVAG231AAGGMALLLL241GVAGAGGAMC
251-300251WRRRRAKPSE261SRHPGPGSFG271RGGSLGLGGG281GGMGPREAEP291GELGIALRGG
301-340301GTADPPFCPH311YEKVSGDYGH321PVYIVQDGPP331QSPPNIYYKV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 62 | Ephrin |
Brain
(34200797)
| - |
GPS-Palm: 0.81
Deep-Palm: 0.91
|
|
| 92 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.66
Deep-Palm: 0.89
|
|
| 104 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.78
Deep-Palm: 0.95
|
|
| 156 | - | - | - |
GPS-Palm: 0.84
Deep-Palm: 0.98
|
|
| 250 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.98
|
|
| 308 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
brain
(39008777)
| - |
Deep-Palm: 0.93
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Brain
Specificity: 0.050
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
19
Brain tissue (Mass)
Specificity: 0.950
19/56 (33.9%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.