Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35405 | Pld3 | 5'-3' exonuclease PLD3 (EC 3.1.16.1) … | Mus musculus (Mouse) | 488 aa |
Protein Details: O35405 (Pld3)
Protein Information
| Accession | O35405 |
|---|---|
| Protein Names | 5'-3' exonuclease PLD3 (EC 3.1.16.1) ((S,S)-bis(monoacylglycero)phosphate synthase PLD3) (EC 3.1.4.-) (Phospholipase D3) (Schwannoma-associated protein 9) (SAM-9) |
| Gene Symbol | Pld3 |
| Organism | Mus musculus (Mouse) |
| Length | 488 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 35358180 35477839 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MKPKLMYQEL11KVPVEEPAGE21LPLNEIEAWK31AAEKKARWVL41LVLILAVVGF
51-10051GALMTQLFLW61EYGDLHLFGP71NQRPAPCYDP81CEAVLVESIP91EGLEFPNATT
101-150101SNPSTSQAWL111GLLAGAHSSL121DIASFYWTLT131NNDTHTQEPS141AQQGEEVLQQ
151-200151LQALAPRGVK161VRIAVSKPNG171PLADLQSLLQ181SGAQVRMVDM191QKLTHGVLHT
201-250201KFWVVDQTHF211YLGSANMDWR221SLTQVKELGV231VMYNCSCLAR241DLTKIFEAYW
251-300251FLGQAGSSIP261STWPRSFDTR271YNQETPMEIC281LNGTPALAYL291ASAPPPLCPS
301-350301GRTPDLKALL311NVVDSARSFI321YIAVMNYLPT331MEFSHPRRFW341PAIDDGLRRA
351-400351AYERGVKVRL361LISCWGHSDP371SMRSFLLSLA381ALHDNHTHSD391IQVKLFVVPT
401-450401DESQARIPYA411RVNHNKYMVT421ERASYIGTSN431WSGSYFTETA441GTSLLVTQNG
451-488451HGGLRSQLEA461VFLRDWESPY471SHDLDTSANS481VGNACRLL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 77 | - | - | - |
Deep-Palm: 0.67
|
|
| 81 | - | - | - |
Deep-Palm: 0.84
|
|
| 235 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.90
|
|
| 237 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.89
|
|
| 280 | - | - | - |
Deep-Palm: 0.88
|
|
| 298 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.98
|
|
| 364 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.80
Deep-Palm: 0.96
|
|
| 485 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.03
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
2
Brain
Specificity: 0.091
2/2 (100.0%)
2
Testis
Specificity: 0.091
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.818
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.