Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35454 | Clcn6 | H(+)/Cl(-) exchange transporter 6 (Chloride … | Mus musculus (Mouse) | 870 aa |
Protein Details: O35454 (Clcn6)
Protein Information
| Accession | O35454 |
|---|---|
| Protein Names | H(+)/Cl(-) exchange transporter 6 (Chloride channel protein 6) (ClC-6) (Chloride transport protein 6) |
| Gene Symbol | Clcn6 |
| Organism | Mus musculus (Mouse) |
| Length | 870 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29217618 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAGCRGSVCC11CCRWCCCCGE21RESRTPEELT31ILGETQEEED41EILPRKDYES
51-10051LDYDRCINDP61YLEVLETMDN71KKGRRYEAVK81WMVVFAIGVC91TGLVGLFVDF
101-150101SVRLFTQLKF111GVVQTSVEEC121SQKGCLALSL131LELLGFNLTF141VFLASLLVLI
151-200151EPVAAGSGIP161EIKCYLNGVK171VPGIVRLRTL181LCKVFGVLFS191VSGGLFVGKE
201-250201GPMIHSGAVV211GAGLPQFQSI221SLRKIQFNFP231YFRSDRDKRD241FVSAGAAAGV
251-300251AAAFGAPIGG261TLFSLEEGSS271FWNQGLTWKV281LFCSMSATFT291LNFFRSGIQF
301-350301GSWGSFQLPG311LLNFGEFKCS321DSDKKCHLWT331AMDLGFFVVM341GVIGGLLGAT
351-400351FNCLNKRLAK361YRMRNVHPKP371KLVRVLESLL381VSLVTTVVVF391VASMVLGECR
401-450401QMSSTSQTGN411GSFQLQVTSE421DVNSTIKAFF431CPNDTYNDMA441TLFFNSQESA
451-500451ILQLFHQDGT461FSPVTLALFF471ILYFLLACWT481FGTSVPSGLF491VPSLLCGAAF
501-550501GRLVANVLKS511YIGLGHLYSG521TFALIGAAAF531LGGVVRMTIS541LTVILIESTN
551-600551EITYGLPIMV561TLMVAKWTGD571LFNKGIYDVH581IGLRGVPLLE591WETDVEMDKL
601-650601RASDIMEPNL611TYVYPHTRIQ621SLVSILRTTV631HHAFPVVTEN641RGNEKEFMKG
651-700651NQLISNNIKF661KKSSILTRAG671EQRKRGQSMK681SYPSSELRNV691CDEHVASEEP
701-750701AEKEDLLQQM711LERRYTPYPN721LYPDQSPSED731WTMEERFRPL741TFHGLVLRSQ
751-800751LVTLLVRGVC761YSESQSSASQ771PRLSYAEMAE781DYPRYPDIHD791LDLTLLNPRM
801-850801IVDVTPYMNP811SPFTVSPNTH821VSQVFNLFRT831MGLRHLPVVN841AVGEIVGIIT
851-870851RHNLTNEFLQ861ARLRQHYQTL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 4 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.01
|
|
| 9 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.01
|
|
| 10 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.02
|
|
| 11 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.02
|
|
| 12 | - | - | - |
GPS-Palm: 0.96
Deep-Palm: 0.03
|
|
| 15 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.96
Deep-Palm: 0.20
|
|
| 16 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.25
|
|
| 17 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.97
Deep-Palm: 0.37
|
|
| 18 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.41
|
|
| 56 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.44
|
|
| 90 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.38
|
|
| 120 | SWISSPALM DBPTM CYSMODDB | - |
Forebrain
(28680068)
|
Brain
(35358180)
|
GPS-Palm: 0.70
Deep-Palm: 0.98
|
| 125 | - | - | - |
Deep-Palm: 0.98
|
|
| 164 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.90
|
|
| 182 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.98
|
|
| 283 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.30
|
|
| 319 | - | - | - |
Deep-Palm: 0.54
|
|
| 326 | - | - | - |
Deep-Palm: 0.16
|
|
| 353 | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.93
|
|
| 399 | - | - | - |
GPS-Palm: 0.77
Deep-Palm: 0.60
|
|
| 431 | - | - | - |
Deep-Palm: 0.04
|
|
| 478 | - | - | - |
Deep-Palm: 0.71
|
|
| 496 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.96
|
|
| 691 | - | - |
Brain
(35358180)
|
Deep-Palm: 0.86
|
|
| 760 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.79
Deep-Palm: 0.98
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
Raw 264.7
Specificity: 0.250
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
Brain tissue (Mass)
Specificity: 0.750
3/56 (5.4%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.