Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O35604 | Npc1 | NPC intracellular cholesterol transporter 1 … | Mus musculus (Mouse) | 1277 aa |
Protein Details: O35604 (Npc1)
Protein Information
| Accession | O35604 |
|---|---|
| Protein Names | NPC intracellular cholesterol transporter 1 (Niemann-Pick C1 protein) |
| Gene Symbol | Npc1 |
| Organism | Mus musculus (Mouse) |
| Length | 1277 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 28680068 29217618 29575903 31772009 35477839 37925639 39008777 |
| Database Sources | CysModDB dbPTM SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.731
Bubble Size: Positive Samples Count
Color Intensity: Positive Ratio
19
Liver tissue
Specificity: 0.731
19/19 (100.0%)
3
Neural Stem Cells
Specificity: 0.115
3/3 (100.0%)
2
Macrophage Raw 264.7
Specificity: 0.077
2/2 (100.0%)
2
Testis
Specificity: 0.077
2/2 (100.0%)
0
Brain tissue
Specificity: 0.000
0/12 (0.0%)
0
Liver membrane
Specificity: 0.000
0/6 (0.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Bars are grouped by tissue/cell line for easy comparison.
Protein Sequence
Single Types:
Experimental Database High Prediction Medium Prediction Low Prediction
Experimental Database High Prediction Medium Prediction Low Prediction
Combined Types:
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
All Three Exp + DB Exp + High Pred Exp + Med Pred Exp + Low Pred DB + High Pred DB + Med Pred DB + Low Pred Cysteine
1-501MGAHHPALGL11LLLLLCPAQV21FSQSCVWYGE31CGIATGDKRY41NCKYSGPPKP
51-10051LPKDGYDLVQ61ELCPGLFFDN71VSLCCDIQQL81QTLKSNLQLP91LQFLSRCPSC
101-150101FYNLMTLFCE111LTCSPHQSQF121LNVTATEDYF131DPKTQENKTN141VKELEYFVGQ
151-200151SFANAMYNAC161RDVEAPSSNE171KALGLLCGRD181ARACNATNWI191EYMFNKDNGQ
201-250201APFTIIPVFS211DLSILGMEPM221RNATKGCNES231VDEVTGPCSC241QDCSIVCGPK
251-300251PQPPPPPMPW261RIWGLDAMYV271IMWVTYVAFL281FVFFGALLAV291WCHRRRYFVS
301-350301EYTPIDSNIA311FSVNSSDKGE321ASCCDPLGAA331FDDCLRRMFT341KWGAFCVRNP
351-400351TCIIFFSLAF361ITVCSSGLVF371VQVTTNPVEL381WSAPHSQARL391EKEYFDKHFG
401-450401PFFRTEQLII411QAPNTSVHIY421EPYPAGADVP431FGPPLNKEIL441HQVLDLQIAI
451-500451ESITASYNNE461TVTLQDICVA471PLSPYNKNCT481IMSVLNYFQN491SHAVLDSQVG
501-550501DDFYIYADYH511THFLYCVRAP521ASLNDTSLLH531GPCLGTFGGP541VFPWLVLGGY
551-600551DDQNYNNATA561LVITFPVNNY571YNDTERLQRA581WAWEKEFISF591VKNYKNPNLT
601-650601ISFTAERSIE611DELNRESNSD621VFTVIISYVV631MFLYISLALG641HIQSCSRLLV
651-700651DSKISLGIAG661ILIVLSSVAC671SLGIFSYMGM681PLTLIVIEVI691PFLVLAVGVD
701-750701NIFILVQTYQ711RDERLQEETL721DQQLGRILGE731VAPTMFLSSF741SETSAFFFGA
751-800751LSSMPAVHTF761SLFAGMAVLI771DFLLQITCFV781SLLGLDIKRQ791EKNHLDILCC
801-850801VRGADDGQGS811HASESYLFRF821FKNYFAPLLL831KDWLRPIVVA841VFVGVLSFSV
851-900851AVVNKVDIGL861DQSLSMPNDS871YVIDYFKSLA881QYLHSGPPVY891FVLEEGYNYS
901-950901SRKGQNMVCG911GMGCDNDSLV921QQIFNAAELD931TYTRVGFAPS941SWIDDYFDWV
951-1000951SPQSSCCRLY961NVTHQFCNAS971VMDPTCVRCR981PLTPEGKQRP991QGKEFMKFLP
1001-10501001MFLSDNPNPK1011CGKGGHAAYG1021SAVNIVGDDT1031YIGATYFMTY1041HTILKTSADY
1051-11001051TDAMKKARLI1061ASNITETMRS1071KGSDYRVFPY1081SVFYVFYEQY1091LTIIDDTIFN
1101-11501101LSVSLGSIFL1111VTLVVLGCEL1121WSAVIMCITI1131AMILVNMFGV1141MWLWGISLNA
1151-12001151VSLVNLVMSC1161GISVEFCSHI1171TRAFTMSTKG1181SRVSRAEEAL1191AHMGSSVFSG
1201-12501201ITLTKFGGIV1211VLAFAKSQIF1221EIFYFRMYLA1231MVLLGATHGL1241IFLPVLLSYI
1251-12771251GPSVNKAKRH1261TTYERYRGTE1271RERLLNF
Palmitoylation Sites Details
| Position | Sources | Domains | Experimental PMIDs |
|---|---|---|---|
| 42 | Prediction (Low) | - | - |
| 74 | Prediction (Low) | - | - |
| 75 | Prediction (Medium) | - | - |
| 97 | Prediction (Low) | - | - |
| 177 | Experimental Prediction (High) | Niemann-Pick C1 N terminus | 28526873 |
| 184 | Prediction (Medium) | - | - |
| 292 | Prediction (High) | - | - |
| 323 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28680068 |
| 324 | Experimental CYSMODDB SWISSPALM DBPTM | - | 28680068, 28526873 |
| 334 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (High) | - | 28680068 |
| 346 | Experimental Prediction (High) | - | 28680068 |
| 352 | Prediction (Low) | - | - |
| 364 | Prediction (Low) | - | - |
| 645 | Prediction (High) | - | - |
| 670 | Prediction (Low) | - | - |
| 799 | Experimental CYSMODDB SWISSPALM DBPTM | Sterol-sensing domain of SREBP cleavage-activation | 28680068 |
| 800 | Experimental CYSMODDB SWISSPALM DBPTM Prediction (Low) | Sterol-sensing domain of SREBP cleavage-activation | 28680068, 28526873 |
| 909 | Prediction (Low) | - | - |
| 976 | Prediction (Low) | - | - |
| 979 | Experimental Prediction (Low) | - | 39008777 |