Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O43657 | TSPAN6 | Tetraspanin-6 (Tspan-6) (A15 homolog) (Putative … | Homo sapiens (Human) | 245 aa |
Protein Details: O43657 (TSPAN6)
Protein Information
| Accession | O43657 |
|---|---|
| Protein Names | Tetraspanin-6 (Tspan-6) (A15 homolog) (Putative NF-kappa-B-activating protein 321) (T245 protein) (Tetraspanin TM4-D) (Transmembrane 4 superfamily member 6) |
| Gene Symbol | TSPAN6 |
| Organism | Homo sapiens (Human) |
| Length | 245 aa |
| Isoforms | No isoforms |
| Related PMIDs | 24357059 31251020 32944167 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MASPSRRLQT11KPVITCFKSV21LLIYTFIFWI31TGVILLAVGI41WGKVSLENYF
51-10051SLLNEKATNV61PFVLIATGTV71IILLGTFGCF81ATCRASAWML91KLYAMFLTLV
101-150101FLVELVAAIV111GFVFRHEIKN121SFKNNYEKAL131KQYNSTGDYR141SHAVDKIQNT
151-200151LHCCGVTDYR161DWTDTNYYSE171KGFPKSCCKL181EDCTPQRDAD191KVNNEGCFIK
201-245201VMTIIESEMG211VVAGISFGVA221CFQLIGIFLA231YCLSRAITNN241QYEIV
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 16 | - | - | - |
GPS-Palm: 0.95
Deep-Palm: 0.70
|
|
| 79 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.97
|
|
| 83 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.95
|
|
| 153 | - | - | - |
Deep-Palm: 0.39
|
|
| 154 | - | - | - |
Deep-Palm: 0.47
|
|
| 177 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.42
|
| 178 | SWISSPALM DBPTM CYSMODDB | Tetraspanin family | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.57
|
| 183 | SWISSPALM DBPTM CYSMODDB | - | - | - |
Deep-Palm: 0.35
|
| 197 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.30
|
|
| 221 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.70
|
|
| 232 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.45
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
PC3
Specificity: 0.500
3/3 (100.0%)
2
LNCaP
Specificity: 0.333
2/2 (100.0%)
1
HUVECs
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.