Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O54774 | Ap3d1 | AP-3 complex subunit delta-1 (AP-3 … | Mus musculus (Mouse) | 1199 aa |
Protein Details: O54774 (Ap3d1)
Protein Information
| Accession | O54774 |
|---|---|
| Protein Names | AP-3 complex subunit delta-1 (AP-3 complex subunit delta) (Adaptor-related protein complex 3 subunit delta-1) (Delta-adaptin) (mBLVR1) |
| Gene Symbol | Ap3d1 |
| Organism | Mus musculus (Mouse) |
| Length | 1199 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29660268 29733200 31311849 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | SwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MALKMVKGSI11DRMFDKNLQD21LVRGIRNHKE31DEAKYISQCI41DEIKQELKQD
51-10051NIAVKANAVC61KLTYLQMLGY71DISWAAFNII81EVMSASKFTF91KRVGYLAASQ
101-150101CFHEGTDVIM111LTTNQIRKDL121SSPSQYDTGV131ALTGLSCFVT141PDLARDLAND
151-200151IMTLMSHTKP161YIRKKAVLIM171YKVFLKYPES181LRPAFPRLKE191KLEDPDPGVQ
201-250201SAAVNVICEL211ARRNPKNYLS221LAPLFFKLMT231SSTNNWVLIK241IIKLFGALTP
251-300251LEPRLGKKLI261EPLTNLIHST271SAMSLLYECV281NTVIAVLISL291SSGMPNHSAS
301-350301IQLCVQKLRI311LIEDSDQNLK321YLGLLAMSKI331LKTHPKSVQS341HKDLILQCLD
351-400351DKDESIRLRA361LDLLYGMVSK371KNLMEIVKKL381MTHVDKAEGT391TYRDELLTKI
401-450401IDICSQSNYQ411HITNFEWYIS421ILVELTRLEG431TRHGHLIAAQ441MLDVAIRVKA
451-500451IRKFAVSQMS461SLLDSAHLVA471SSTQRNGICE481VLYAAAWICG491EFSEHLQGPQ
501-550501QTLEAMLRPK511VTTLPGHIQA521VYVQNVVKLY531ASILQQKEQA541ADTEAAQEVT
551-600551QLLVERLPQF561VQSADLEVQE571RASCILQLVK581HVQKLQAKGV591PVAEEVSALF
601-650601AGELNPVAPK611AQKKVPVPEG621LDLDAWINEP631PSDSESEDEK641PKAIFHEEEP
651-700651RHTRRRQPEE661DEEELARRRE671ARKQEQANNP681FYIKSSPSPQ691KRYQDAPGVE
701-750701HIPVVQIDLS711VPLKVPGMPM721SDQYVKLEEQ731RRHRQRLEKD741KKRKKKEKGK
751-800751RRHSSLPTES761DEDIAPAQRV771DIITEEMPEN781ALPSDEDDKD791PNDPYRALDI
801-850801DLDKPLADSE811KLPVQKHRNA821EAVKSPEKEG831VLGVEKKSKK841PKKKEKKTKE
851-900851REREKKDKKG861EDLDFWLSTT871PPPAAAPIPA881PSTEELAAST891ITSPKDECEV
901-950901LKGEEEDHVD911HDQERKSSRH921KKKKHRKEKE931KEERPRDKKK941AKKKQVAPLE
951-1000951NGAAAEEEEE961PIPPMSSYCL971LAESPYIKVT981YDIQASLQKD991SQVTVSIILE
1001-10501001NQSSSFLKNM1011ELNVLDSLNT1021KMTRPEGSSV1031HDGVPVPFQL1041PPGVSNEAQF
1051-11001051VFTIQSIVMA1061QKLKGTLSFI1071AKDDEGATHE1081KLDFRLHFSC1091SSYLITTPCY
1101-11501101SDAFAKLLES1111GDLSMNSIKV1121DGISMSFQNL1131LAKICFYHHF1141SVVERVDSCA
1151-11991151SMYSRSIQGH1161HVCLLVKKGE1171SSVSVDGKCS1181DATLLSSLLE1191EMKTTLAQC
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 39 | Armadillo-like helical Armadillo-type fold Adaptor protein complex AP-3, delta subunit | - |
Brain
(35358180)
|
GPS-Palm: 0.77
Deep-Palm: 0.66
|
|
| 60 | - | - | - |
GPS-Palm: 0.74
Deep-Palm: 0.87
|
|
| 101 | - | - | - |
Deep-Palm: 0.93
|
|
| 137 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.82
Deep-Palm: 0.94
|
|
| 208 | - | - |
Brain
(35358180)
|
GPS-Palm: 0.94
Deep-Palm: 0.96
|
|
| 279 | - | - | - |
Deep-Palm: 0.72
|
|
| 304 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.74
|
|
| 348 | - | - |
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.74
Deep-Palm: 0.97
|
|
| 404 | - | - | - |
GPS-Palm: 0.73
Deep-Palm: 0.06
|
|
| 479 | - | - | - |
Deep-Palm: 0.63
|
|
| 489 | - | - | - |
Deep-Palm: 0.52
|
|
| 574 | - |
Brain
(31311849)
|
Brain
(35358180)
Brain
(31311849)
|
GPS-Palm: 0.84
Deep-Palm: 0.97
|
|
| 898 | - | - | - |
Deep-Palm: 0.35
|
|
| 969 | - | - | - |
Deep-Palm: 0.83
|
|
| 1090 | - | - | - |
Deep-Palm: 0.54
|
|
| 1099 | - | - | - |
Deep-Palm: 0.92
|
|
| 1135 | - | - | - |
Deep-Palm: 0.16
|
|
| 1149 | - | - | - |
Deep-Palm: 0.04
|
|
| 1163 | - | - | - |
Deep-Palm: 0.84
|
|
| 1179 | - | - | - |
Deep-Palm: 0.98
|
|
| 1199 | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.05
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.400
4
Brain
Specificity: 0.190
4/4 (100.0%)
4
Liver
Specificity: 0.190
4/4 (100.0%)
2
Testis
Specificity: 0.095
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
11
Brain tissue (Mass)
Specificity: 0.524
11/56 (19.6%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.