Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O55125 | Nipsnap1 | Protein NipSnap homolog 1 (NipSnap1) | Mus musculus (Mouse) | 284 aa |
Protein Details: O55125 (Nipsnap1)
Protein Information
| Accession | O55125 |
|---|---|
| Protein Names | Protein NipSnap homolog 1 (NipSnap1) |
| Gene Symbol | Nipsnap1 |
| Organism | Mus musculus (Mouse) |
| Length | 284 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 29660268 29733200 31311849 34200797 34884899 35358180 35477839 37925639 29217618 (mass) 31311849 (mass) 31772009 (mass) 34884899 (mass) 35358180 (mass) 37925639 (mass) |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAPRLCIISA11AARRLFTKPR21PRAGDLAAAG31AVRFYSKDSE41GSWFRSLFVH
51-10051KVDPRKDAHS61TLLSKKETSN71LYKIQFHNVK81PECLDAYNSL91TEAVLPKLHL
101-150101DEDYPCSLVG111NWNTWYGEQD121QAVHLWRFSG131GYPALMDCMN141KLKNNKEYLE
151-200151FRKERSKMLL161SRRNQLLLEF171SFWNEPQPRA181GPNIYELRTY191KLKPGTMIEW
201-250201GNNWARAIKY211RQENQEAVGG221FFSQIGELYV231VHHLWAYKDL241QSREETRNAA
251-284251WRKRGWDENV261YYTVPLVRHM271ESRIMIPLKI281SPLQ
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 6 | - | - | - |
GPS-Palm: 0.97
Deep-Palm: 0.06
|
|
| 83 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
Brain
(31311849)
Forebrain
(28680068)
|
Brain
(35358180)
Brain
(31311849)
|
Deep-Palm: 0.94
|
| 106 | - | - | - |
Deep-Palm: 0.25
|
|
| 138 | SWISSPALM DBPTM CYSMODDB | - |
Liver
(28526873)
|
Brain
(35358180)
|
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.462
6
Liver
Specificity: 0.194
6/6 (100.0%)
6
Brain
Specificity: 0.194
6/6 (100.0%)
1
Testis
Specificity: 0.032
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
18
Brain tissue (Mass)
Specificity: 0.581
18/56 (32.1%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.