Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O55135 | Eif6 | Eukaryotic translation initiation factor 6 … | Mus musculus (Mouse) | 245 aa |
Protein Details: O55135 (Eif6)
Protein Information
| Accession | O55135 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 6 (eIF-6) (B4 integrin interactor) (CAB) (p27(BBP)) |
| Gene Symbol | Eif6 |
| Organism | Mus musculus (Mouse) |
| Length | 245 aa |
| Isoforms | No isoforms |
| Related PMIDs | 29733200 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAVRASFENN11CEVGCFAKLT21NAYCLVAIGG31SENFYSVFEG41ELSDAIPVVH
51-10051ASIAGCRIIG61RMCVGNRHGL71LVPNNTTDQE81LQHIRNSLPD91SVQIRRVEER
101-150101LSALGNVTTC111NDYVALVHPD121LDRETEEILA131DVLKVEVFRQ141TVADQVLVGS
151-200151YCVFSNQGGL161VHPKTSIEDQ171DELSSLLQVP181LVAGTVNRGS191EVIAAGMVVN
201-245201DWCAFCGLDT211TSTELSVVES221VFKLNEAKPS231TIATSMRDSL241IDSLT
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 11 | Pentein Translation initiation factor IF6 | - | - |
Deep-Palm: 0.03
|
|
| 15 | Pentein Translation initiation factor IF6 | - | - |
Deep-Palm: 0.57
|
|
| 24 | Pentein Translation initiation factor IF6 | - | - |
Deep-Palm: 0.38
|
|
| 56 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.80
|
|
| 63 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.94
|
|
| 110 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.98
|
|
| 152 | SWISSPALM DBPTM CYSMODDB | eIF-6 family |
liver
(26165157)
| - |
Deep-Palm: 0.97
|
| 203 | - | - | - |
Deep-Palm: 0.50
|
|
| 206 | - | - | - |
Deep-Palm: 0.41
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.500
3
Liver
Specificity: 0.500
3/3 (100.0%)
2
Testis
Specificity: 0.333
2/2 (100.0%)
1
Brain
Specificity: 0.167
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.