Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O70194 | Eif3d | Eukaryotic translation initiation factor 3 … | Mus musculus (Mouse) | 548 aa |
Protein Details: O70194 (Eif3d)
Protein Information
| Accession | O70194 |
|---|---|
| Protein Names | Eukaryotic translation initiation factor 3 subunit D (eIF3d) (Eukaryotic translation initiation factor 3 subunit 7) (eIF-3-zeta) (eIF3 p66) |
| Gene Symbol | Eif3d |
| Organism | Mus musculus (Mouse) |
| Length | 548 aa |
| Isoforms | No isoforms |
| Related PMIDs | 28526873 34200797 34884899 35477839 37925639 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MAKFMTPVIQ11DNPSGWGPCA21VPEQFRDMPY31QPFSKGDRLG41KVADWTGATY
51-10051QDKRYTNKYS61SQFGGGSQYA71YFHEEDETSF81QLVDTARTQK91TAYQRNRMRF
101-150101AQRNLRRDKD111RRNMVQFNLQ121TLPKSAKQKE131RERIRLQKKF141QKQFGVRQKW
151-200151DQKSQKPRDS161SVEVRSDWEV171KEEMDFPQLM181KMRYLEVSEP191QDIECCGALE
201-250201YYDKAFDRIT211TRSEKPLRSI221KRIFHTVTTT231DDPVIRKLAK241TQGNVFATDA
251-300251ILATLMSCTR261SVYSWDIVVQ271RVGSKLFFDK281RDNSDFDLLT291VSETANEPPQ
301-350301DEGNSFNSPR311NLAMEATYIN321HNFSQQCLRM331GRERYNFPNP341NPFVEDDMDK
351-400351NEIASVAYRY361RRWKLGDDID371LIVRCEHDGV381MTGANGEVSF391INIKTLNEWD
401-450401SRHCNGVDWR411QKLDSQRGAV421IATELKNNSY431KLARWTCCAL441LAGSEYLKLG
451-500451YVSRYHVKDS461SRHVILGTQQ471FKPNEFASQI481NLSVENAWGI491LRCVIDICMK
501-548501LEEGKYLILK511DPNKQVIRVY521SLPDGTFSSE531EDEEDEEEEE541EEEEEEET
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 19 | SWISSPALM DBPTM CYSMODDB | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) Eukaryotic translation initiation factor 3 subunit D |
Liver
(28526873)
| - |
GPS-Palm: 0.73
Deep-Palm: 0.15
|
| 195 | - | - | - |
Deep-Palm: 0.43
|
|
| 196 | - | - | - |
Deep-Palm: 0.35
|
|
| 258 | - | - | - |
GPS-Palm: 0.80
Deep-Palm: 0.80
|
|
| 327 | - | - | - |
GPS-Palm: 0.88
Deep-Palm: 0.04
|
|
| 375 | - | - | - |
Deep-Palm: 0.24
|
|
| 404 | - | - | - |
Deep-Palm: 0.36
|
|
| 437 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.92
|
|
| 438 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.90
|
|
| 493 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.71
|
|
| 498 | - | - | - |
GPS-Palm: 0.86
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.556
5
Liver
Specificity: 0.556
5/5 (100.0%)
2
Brain
Specificity: 0.222
2/2 (100.0%)
2
Testis
Specificity: 0.222
2/2 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.