Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O75376 | NCOR1 | Nuclear receptor corepressor 1 (N-CoR) … | Homo sapiens (Human) | 2440 aa |
Protein Details: O75376 (NCOR1)
Protein Information
| Accession | O75376 |
|---|---|
| Protein Names | Nuclear receptor corepressor 1 (N-CoR) (N-CoR1) |
| Gene Symbol | NCOR1 |
| Organism | Homo sapiens (Human) |
| Length | 2440 aa |
| Isoforms | No isoforms |
| Related PMIDs | 31382980 |
| Database Sources | CysModDBdbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MSSSGYPPNQ11GAFSTEQSRY21PPHSVQYTFP31NTRHQQEFAV41PDYRSSHLEV
51-10051SQASQLLQQQ61QQQQLRRRPS71LLSEFHPGSD81RPQERRTSYE91PFHPGPSPVD
101-150101HDSLESKRPR111LEQVSDSHFQ121RVSAAVLPLV131HPLPEGLRAS141ADAKKDPAFG
151-200151GKHEAPSSPI161SGQPCGDDQN171ASPSKLSKEE181LIQSMDRVDR191EIAKVEQQIL
201-250201KLKKKQQQLE211EEAAKPPEPE221KPVSPPPVEQ231KHRSIVQIIY241DENRKKAEEA
251-300251HKIFEGLGPK261VELPLYNQPS271DTKVYHENIK281TNQVMRKKLI291LFFKRRNHAR
301-350301KQREQKICQR311YDQLMEAWEK321KVDRIENNPR331RKAKESKTRE341YYEKQFPEIR
351-400351KQREQQERFQ361RVGQRGAGLS371ATIARSEHEI381SEIIDGLSEQ391ENNEKQMRQL
401-450401SVIPPMMFDA411EQRRVKFINM421NGLMEDPMKV431YKDRQFMNVW441TDHEKEIFKD
451-500451KFIQHPKNFG461LIASYLERKS471VPDCVLYYYL481TKKNENYKAL491VRRNYGKRRG
501-550501RNQQIARPSQ511EEKVEEKEED521KAEKTEKKEE531EKKDEEEKDE541KEDSKENTKE
551-600551KDKIDGTAEE561TEEREQATPR571GRKTANSQGR581RKGRITRSMT591NEAAAASAAA
601-650601AAATEEPPPP611LPPPPEPIST621EPVETSRWTE631EEMEVAKKGL641VEHGRNWAAI
651-700651AKMVGTKSEA661QCKNFYFNYK671RRHNLDNLLQ681QHKQKTSRKP691REERDVSQCE
701-750701SVASTVSAQE711DEDIEASNEE721ENPEDSEVEA731VKPSEDSPEN741ATSRGNTEPA
751-800751VELEPTTETA761PSTSPSLAVP771STKPAEDESV781ETQVNDSISA791ETAEQMDVDQ
801-850801QEHSAEEGSV811CDPPPATKAD821SVDVEVRVPE831NHASKVEGDN841TKERDLDRAS
851-900851EKVEPRDEDL861VVAQQINAQR871PEPQSDNDSS881ATCSADEDVD891GEPERQRMFP
901-950901MDSKPSLLNP911TGSILVSSPL921KPNPLDLPQL931QHRAAVIPPM941VSCTPCNIPI
951-1000951GTPVSGYALY961QRHIKAMHES971ALLEEQRQRQ981EQIDLECRSS991TSPCGTSKSP
1001-10501001NREWEVLQPA1011PHQVITNLPE1021GVRLPTTRPT1031RPPPPLIPSS1041KTTVASEKPS
1051-11001051FIMGGSISQG1061TPGTYLTSHN1071QASYTQETPK1081PSVGSISLGL1091PRQQESAKSA
1101-11501101TLPYIKQEEF1111SPRSQNSQPE1121GLLVRAQHEG1131VVRGTAGAIQ1141EGSITRGTPT
1151-12001151SKISVESIPS1161LRGSITQGTP1171ALPQTGIPTE1181ALVKGSISRM1191PIEDSSPEKG
1201-12501201REEAASKGHV1211IYEGKSGHIL1221SYDNIKNARE1231GTRSPRTAHE1241ISLKRSYESV
1251-13001251EGNIKQGMSM1261RESPVSAPLE1271GLICRALPRG1281SPHSDLKERT1291VLSGSIMQGT
1301-13501301PRATTESFED1311GLKYPKQIKR1321ESPPIRAFEG1331AITKGKPYDG1341ITTIKEMGRS
1351-14001351IHEIPRQDIL1361TQESRKTPEV1371VQSTRPIIEG1381SISQGTPIKF1391DNNSGQSAIK
1401-14501401HNVKSLITGP1411SKLSRGMPPL1421EIVPENIKVV1431ERGKYEDVKA1441GETVRSRHTS
1451-15001451VVSSGPSVLR1461STLHEAPKAQ1471LSPGIYDDTS1481ARRTPVSYQN1491TMSRGSPMMN
1501-15501501RTSDVTISSN1511KSTNHERKST1521LTPTQRESIP1531AKSPVPGVDP1541VVSHSPFDPH
1551-16001551HRGSTAGEVY1561RSHLPTHLDP1571AMPFHRALDP1581AAAAYLFQRQ1591LSPTPGYPSQ
1601-16501601YQLYAMENTR1611QTILNDYITS1621QQMQVNLRPD1631VARGLSPREQ1641PLGLPYPATR
1651-17001651GIIDLTNMPP1661TILVPHPGGT1671STPPMDRITY1681IPGTQITFPP1691RPYNSASMSP
1701-17501701GHPTHLAAAA1711SAERERERER1721EKERERERIA1731AASSDLYLRP1741GSEQPGRPGS
1751-18001751HGYVRSPSPS1761VRTQETMLQQ1771RPSVFQGTNG1781TSVITPLDPT1791AQLRIMPLPA
1801-18501801GGPSISQGLP1811ASRYNTAADA1821LAALVDAAAS1831APQMDVSKTK1841ESKHEAARLE
1851-19001851ENLRSRSAAV1861SEQQQLEQKT1871LEVEKRSVQC1881LYTSSAFPSG1891KPQPHSSVVY
1901-19501901SEAGKDKGPP1911PKSRYEEELR1921TRGKTTITAA1931NFIDVIITRQ1941IASDKDARER
1951-20001951GSQSSDSSSS1961LSSHRYETPS1971DAIEVISPAS1981SPAPPQEKLQ1991TYQPEVVKAN
2001-20502001QAENDPTRQY2011EGPLHHYRPQ2021QESPSPQQQL2031PPSSQAEGMG2041QVPRTHRLIT
2051-21002051LADHICQIIT2061QDFARNQVSS2071QTPQQPPTST2081FQNSPSALVS2091TPVRTKTSNR
2101-21502101YSPESQAQSV2111HHQRPGSRVS2121PENLVDKSRG2131SRPGKSPERS2141HVSSEPYEPI
2151-22002151SPPQVPVVHE2161KQDSLLLLSQ2171RGAEPAEQRN2181DARSPGSISY2191LPSFFTKLEN
2201-22502201TSPMVKSKKQ2211EIFRKLNSSG2221GGDSDMAAAQ2231PGTEIFNLPA2241VTTSGSVSSR
2251-23002251GHSFADPASN2261LGLEDIIRKA2271LMGSFDDKVE2281DHGVVMSQPM2291GVVPGTANTS
2301-23502301VVTSGETRRE2311EGDPSPHSGG2321VCKPKLISKS2331NSRKSKSPIP2341GQGYLGTERP
2351-24002351SSVSSVHSEG2361DYHRQTPGWA2371WEDRPSSTGS2381TQFPYNPLTM2391RMLSSTPPTP
2401-24402401IACAPSAVNQ2411AAPHQQNRIW2421EREPAPLLSA2431QYETLSDSDD
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 165 | - | - | - |
Deep-Palm: 0.74
|
|
| 308 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.46
|
|
| 474 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.90
|
|
| 662 | SWISSPALM DBPTM CYSMODDB | Myb-like DNA-binding domain | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.42
|
| 699 | - | - | - |
Deep-Palm: 0.87
|
|
| 811 | - | - | - |
Deep-Palm: 0.36
|
|
| 883 | - | - | - |
Deep-Palm: 0.51
|
|
| 943 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.36
|
|
| 946 | - | - | - |
Deep-Palm: 0.35
|
|
| 987 | - | - | - |
Deep-Palm: 0.82
|
|
| 994 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.69
|
|
| 1274 | - | - | - |
GPS-Palm: 0.89
Deep-Palm: 0.94
|
|
| 1880 | - | - | - |
Deep-Palm: 0.89
|
|
| 2056 | - | - | - |
GPS-Palm: 0.87
Deep-Palm: 0.65
|
|
| 2322 | - | - | - |
Deep-Palm: 0.87
|
|
| 2403 | - | - | - |
Deep-Palm: 0.54
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
U937 cell
Specificity: 1.000
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 187 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 254 | F → C | 0.007299 | SNP | Missense Mutation | READ |
| 498 | R → C | 0.002747 | SNP | Missense Mutation | LIHC |
| 580 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 581 | R → C | 0.005618 | SNP | Missense Mutation | PAAD |
| 691 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 691 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 987 | C → Y | 0.002506 | SNP | Missense Mutation | COAD |
| 1445 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1512 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 1628 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 1755 | R → C | 0.001014 | SNP | Missense Mutation | BRCA |
| 1755 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 1755 | R → C | 0.003460 | SNP | Missense Mutation | CESC |
| 1950 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 2100 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 2214 | R → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 2214 | R → C | 0.002141 | SNP | Missense Mutation | SKCM |
| 2214 | R → C | 0.001887 | SNP | Missense Mutation | UCEC |
| 2219 | S → C | 0.001764 | SNP | Missense Mutation | LUAD |
| 2249 | S → C | 0.002427 | SNP | Missense Mutation | BLCA |
| 2251 | G → C | 0.001969 | SNP | Missense Mutation | HNSC |
| 2362 | Y → C | 0.002506 | SNP | Missense Mutation | COAD |