Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O75509 | TNFRSF21 | Tumor necrosis factor receptor superfamily … | Homo sapiens (Human) | 655 aa |
Protein Details: O75509 (TNFRSF21)
Protein Information
| Accession | O75509 |
|---|---|
| Protein Names | Tumor necrosis factor receptor superfamily member 21 (Death receptor 6) (CD antigen CD358) |
| Gene Symbol | TNFRSF21 |
| Organism | Homo sapiens (Human) |
| Length | 655 aa |
| Isoforms | No isoforms |
| Related PMIDs | 32944167 |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGTSPSSSTA11LASCSRIARR21ATATMIAGSL31LLLGFLSTTT41AQPEQKASNL
51-10051IGTYRHVDRA61TGQVLTCDKC71PAGTYVSEHC81TNTSLRVCSS91CPVGTFTRHE
101-150101NGIEKCHDCS111QPCPWPMIEK121LPCAALTDRE131CTCPPGMFQS141NATCAPHTVC
151-200151PVGWGVRKKG161TETEDVRCKQ171CARGTFSDVP181SSVMKCKAYT191DCLSQNLVVI
201-250201KPGTKETDNV211CGTLPSFSSS221TSPSPGTAIF231PRPEHMETHE241VPSSTYVPKG
251-300251MNSTESNSSA261SVRPKVLSSI271QEGTVPDNTS281SARGKEDVNK291TLPNLQVVNH
301-350301QQGPHHRHIL311KLLPSMEATG321GEKSSTPIKG331PKRGHPRQNL341HKHFDINEHL
351-400351PWMIVLFLLL361VLVVIVVCSI371RKSSRTLKKG381PRQDPSAIVE391KAGLKKSMTP
401-450401TQNREKWIYY411CNGHGIDILK421LVAAQVGSQW431KDIYQFLCNA441SEREVAAFSN
451-500451GYTADHERAY461AALQHWTIRG471PEASLAQLIS481ALRQHRRNDV491VEKIRGLMED
501-550501TTQLETDKLA511LPMSPSPLSP521SPIPSPNAKL531ENSALLTVEP541SPQDKNKGFF
551-600551VDESEPLLRC561DSTSSGSSAL571SRNGSFITKE581KKDTVLRQVR591LDPCDLQPIF
601-650601DDMLHFLNPE611ELRVIEEIPQ621AEDKLDRLFE631IIGVKSQEAS641QTLLDSVYSH
651-655651LPDLL
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 14 | - | - | - |
GPS-Palm: 0.92
Deep-Palm: 0.89
|
|
| 67 | - | - | - |
Deep-Palm: 0.13
|
|
| 70 | - | - | - |
Deep-Palm: 0.07
|
|
| 80 | - | - | - |
Deep-Palm: 0.06
|
|
| 88 | - | - | - |
GPS-Palm: 0.72
Deep-Palm: 0.06
|
|
| 91 | - | - | - |
GPS-Palm: 0.79
Deep-Palm: 0.10
|
|
| 106 | - | - | - |
Deep-Palm: 0.03
|
|
| 109 | - | - | - |
Deep-Palm: 0.03
|
|
| 113 | - | - | - |
Deep-Palm: 0.04
|
|
| 123 | - | - | - |
GPS-Palm: 0.67
Deep-Palm: 0.05
|
|
| 131 | - | - | - |
Deep-Palm: 0.23
|
|
| 133 | - | - | - |
Deep-Palm: 0.15
|
|
| 144 | - | - | - |
Deep-Palm: 0.05
|
|
| 150 | - | - | - |
GPS-Palm: 0.66
Deep-Palm: 0.58
|
|
| 168 | - | - | - |
Deep-Palm: 0.50
|
|
| 171 | - | - | - |
Deep-Palm: 0.42
|
|
| 186 | - | - | - |
Deep-Palm: 0.34
|
|
| 192 | - | - | - |
GPS-Palm: 0.78
Deep-Palm: 0.77
|
|
| 211 | - | - | - |
Deep-Palm: 0.91
|
|
| 368 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.94
Deep-Palm: 0.98
|
| 411 | - | - | - |
GPS-Palm: 0.69
Deep-Palm: 0.50
|
|
| 438 | - | - | - |
Deep-Palm: 0.82
|
|
| 560 | - | - | - |
Deep-Palm: 0.92
|
|
| 594 | - | - | - |
GPS-Palm: 0.82
Deep-Palm: 0.86
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
3
PC3
Specificity: 1.000
3/3 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.000Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.
Conservation score for cysteine
PhyloP for Cysteine
PhastCons Conservation Scores for Cysteine
TCGA Cysteine Mutation Information
Note: Mutations indicate amino acid changes that may create potential palmitoylation sites.
| Position | Amino Acid Change | Frequency | Type | Function | Cancer Type |
|---|---|---|---|---|---|
| 150 | C → R | 0.002288 | SNP | Missense Mutation | STAD |
| 186 | C → F | 0.002033 | SNP | Missense Mutation | LUSC |
| 368 | C → C | 0.002506 | SNP | Silent | COAD |
| 495 | R → C | 0.002506 | SNP | Missense Mutation | COAD |
| 590 | R → C | 0.002020 | SNP | Missense Mutation | PRAD |