Search Database
Select Protein (1 found)
| UniProt ID | Gene Symbol | Protein Name | Organism | Length | Action |
|---|---|---|---|---|---|
| O75695 | RP2 | Protein XRP2 | Homo sapiens (Human) | 350 aa |
Protein Details: O75695 (RP2)
Protein Information
| Accession | O75695 |
|---|---|
| Protein Names | Protein XRP2 |
| Gene Symbol | RP2 |
| Organism | Homo sapiens (Human) |
| Length | 350 aa |
| Isoforms | No isoforms |
| Related PMIDs | 26111759 29733200 31251020 31382980 32651440 32944167 33636221 31251020 (mass) 32651440 (mass) 36430497 (mass) |
| Database Sources | dbPTMSwissPalm |
These studies detected palmitoylation of this protein in the samples.
Protein Sequence
Types:
Experimental Database High Prediction Non-palmitylated Cys
Experimental Database High Prediction Non-palmitylated Cys
1-501MGCFFSKRRK11ADKESRPENE21EERPKQYSWD31QREKVDPKDY41MFSGLKDETV
51-10051GRLPGTVAGQ61QFLIQDCENC71NIYIFDHSAT81VTIDDCTNCI91IFLGPVKGSV
101-150101FFRNCRDCKC111TLACQQFRVR121DCRKLEVFLC131CATQPIIESS141SNIKFGCFQW
151-200151YYPELAFQFK161DAGLSIFNNT171WSNIHDFTPV181SGELNWSLLP191EDAVVQDYVP
201-250201IPTTEELKAV211RVSTEANRSI221VPISRGQRQK231SSDESCLVVL241FAGDYTIANA
251-300251RKLIDEMVGK261GFFLVQTKEV271SMKAEDAQRV281FREKAPDFLP291LLNKGPVIAL
301-350301EFNGDGAVEV311CQLIVNEIFN321GTKMFVSESK331ETASGDVDSF341YNFADIQMGI
Palmitoylation Sites Details
| Position | Database | Domains | Literature (PMID/Cell-Tissue) | Mass(PMID/Cell-Tissue) | Prediction Scores |
|---|---|---|---|---|---|
| 3 | DBPTM SWISSPALM | - | - | - |
GPS-Palm: 0.98
Deep-Palm: 0.03
|
| 67 | - | - | - |
Deep-Palm: 0.09
|
|
| 70 | - | - | - |
Deep-Palm: 0.09
|
|
| 86 | - | - | - |
Deep-Palm: 0.15
|
|
| 89 | - | - | - |
Deep-Palm: 0.25
|
|
| 105 | - | - | - |
GPS-Palm: 0.70
Deep-Palm: 0.39
|
|
| 108 | - | - | - |
GPS-Palm: 0.71
Deep-Palm: 0.41
|
|
| 110 | - | - | - |
GPS-Palm: 0.85
Deep-Palm: 0.45
|
|
| 114 | - | - | - |
GPS-Palm: 0.81
Deep-Palm: 0.68
|
|
| 122 | - | - | - |
GPS-Palm: 0.65
Deep-Palm: 0.45
|
|
| 130 | - | - | - |
GPS-Palm: 0.83
Deep-Palm: 0.75
|
|
| 131 | - |
HeLa
(37611173)
| - |
GPS-Palm: 0.82
Deep-Palm: 0.85
|
|
| 147 | - | - | - |
Deep-Palm: 0.29
|
|
| 236 | - | - | - |
Deep-Palm: 0.86
|
|
| 311 | - | - | - |
Deep-Palm: 0.84
|
Score Interpretation:
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
• GPS-Palm: Thresholds - High (≥0.8920), Medium (≥0.7766), Low (≥0.6484), Very Low (<0.6484)
• Deep-Palm: Higher score indicates higher probability of palmitoylation (High ≥0.9)
Tissue/Cell Line Expression
Literature Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 0.286
4
Jurkat T cell
Specificity: 0.267
4/4 (100.0%)
4
PC3
Specificity: 0.267
4/4 (100.0%)
3
LNCaP
Specificity: 0.200
3/3 (100.0%)
1
HAP1 cell
Specificity: 0.067
1/1 (100.0%)
1
U937 cell
Specificity: 0.067
1/1 (100.0%)
1
heart
Specificity: 0.067
1/1 (100.0%)
Mass Spectrometry Data - Tissue/Cell Line Expression
Tissue Specificity Index (TSI): 1.000
1
LNCaP cells (Mass)
Specificity: 0.067
1/4 (25.0%)
Palmitoylation Distribution by Study and Tissue/Cell Line
Chart Explanation: Each bar represents a study (PMID).
Blue bars: Literature data, Orange bars: Mass Spectrometry data.
The colored bottom segment shows palmitoylated samples, while the gray top segment shows non-palmitoylated samples.